Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.71■□□□□ 0.11
TraipQ8VIG6 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TraipQ8VIG6 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TraipQ8VIG6 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TraipQ8VIG6 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TraipQ8VIG6 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TraipQ8VIG6 Gm37230-201ENSMUST00000194491 818 ntBASIC15.71■□□□□ 0.11
TraipQ8VIG6 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TraipQ8VIG6 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TraipQ8VIG6 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TraipQ8VIG6 Gm9063-201ENSMUST00000223299 582 ntBASIC15.71■□□□□ 0.11
TraipQ8VIG6 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TraipQ8VIG6 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TraipQ8VIG6 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TraipQ8VIG6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TraipQ8VIG6 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TraipQ8VIG6 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TraipQ8VIG6 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TraipQ8VIG6 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TraipQ8VIG6 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TraipQ8VIG6 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
TraipQ8VIG6 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Gm24543-201ENSMUST00000103867 82 ntBASIC15.7■□□□□ 0.1
TraipQ8VIG6 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Gm15653-201ENSMUST00000119247 907 ntBASIC15.7■□□□□ 0.1
TraipQ8VIG6 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.7■□□□□ 0.1
TraipQ8VIG6 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.7■□□□□ 0.1
TraipQ8VIG6 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.7■□□□□ 0.1
TraipQ8VIG6 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TraipQ8VIG6 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TraipQ8VIG6 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Gm27989-201ENSMUST00000184721 107 ntBASIC15.69■□□□□ 0.1
TraipQ8VIG6 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.69■□□□□ 0.1
TraipQ8VIG6 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TraipQ8VIG6 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TraipQ8VIG6 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TraipQ8VIG6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TraipQ8VIG6 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TraipQ8VIG6 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TraipQ8VIG6 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TraipQ8VIG6 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TraipQ8VIG6 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TraipQ8VIG6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TraipQ8VIG6 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TraipQ8VIG6 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms