Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Gm14859-201ENSMUST00000117752 357 ntBASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Gm25745-201ENSMUST00000174945 133 ntBASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Gm7367-201ENSMUST00000057611 492 ntBASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Pcdh18Q8VHR0 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh18Q8VHR0 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Gm21362-201ENSMUST00000194272 928 ntBASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh18Q8VHR0 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh18Q8VHR0 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms