Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Mir6956-201ENSMUST00000183598 62 ntBASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ndc1Q8VCB1 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ndc1Q8VCB1 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ndc1Q8VCB1 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Ndc1Q8VCB1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ndc1Q8VCB1 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Gm44872-201ENSMUST00000207864 420 ntBASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ndc1Q8VCB1 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ndc1Q8VCB1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ndc1Q8VCB1 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.93□□□□□ -0.18
Ndc1Q8VCB1 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.93□□□□□ -0.18
Ndc1Q8VCB1 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms