Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf8Q8VC56 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 Mir5126-201ENSMUST00000175513 77 ntBASIC14.28□□□□□ -0.12
Rnf8Q8VC56 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.28□□□□□ -0.12
Rnf8Q8VC56 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf8Q8VC56 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf8Q8VC56 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf8Q8VC56 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf8Q8VC56 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf8Q8VC56 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf8Q8VC56 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf8Q8VC56 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf8Q8VC56 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf8Q8VC56 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf8Q8VC56 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf8Q8VC56 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Rnf8Q8VC56 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Rnf8Q8VC56 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf8Q8VC56 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf8Q8VC56 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.27□□□□□ -0.13
Rnf8Q8VC56 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf8Q8VC56 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.27□□□□□ -0.13
Rnf8Q8VC56 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.27□□□□□ -0.13
Rnf8Q8VC56 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.27□□□□□ -0.13
Rnf8Q8VC56 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.27□□□□□ -0.13
Rnf8Q8VC56 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Rnf8Q8VC56 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf8Q8VC56 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf8Q8VC56 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf8Q8VC56 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Rnf8Q8VC56 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf8Q8VC56 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Rnf8Q8VC56 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf8Q8VC56 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf8Q8VC56 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf8Q8VC56 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rnf8Q8VC56 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf8Q8VC56 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Mir5131-201ENSMUST00000175426 93 ntBASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.26□□□□□ -0.13
Rnf8Q8VC56 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf8Q8VC56 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms