Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Top1mtQ8R4U6 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top1mtQ8R4U6 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top1mtQ8R4U6 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top1mtQ8R4U6 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top1mtQ8R4U6 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top1mtQ8R4U6 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Top1mtQ8R4U6 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top1mtQ8R4U6 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.67■□□□□ 0.42
Top1mtQ8R4U6 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Top1mtQ8R4U6 Gm8749-201ENSMUST00000117737 331 ntBASIC17.67■□□□□ 0.42
Top1mtQ8R4U6 Gm13464-201ENSMUST00000119418 935 ntBASIC17.67■□□□□ 0.42
Top1mtQ8R4U6 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Top1mtQ8R4U6 Gm12260-201ENSMUST00000122447 411 ntBASIC17.67■□□□□ 0.42
Top1mtQ8R4U6 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.67■□□□□ 0.42
Top1mtQ8R4U6 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top1mtQ8R4U6 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top1mtQ8R4U6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top1mtQ8R4U6 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Top1mtQ8R4U6 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Top1mtQ8R4U6 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top1mtQ8R4U6 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Top1mtQ8R4U6 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Gm12134-201ENSMUST00000122109 520 ntBASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Top1mtQ8R4U6 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Gm44492-201ENSMUST00000197012 141 ntBASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Top1mtQ8R4U6 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms