Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup35Q8R4R6 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup35Q8R4R6 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup35Q8R4R6 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.07□□□□□ -0.48
Nup35Q8R4R6 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nup35Q8R4R6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Nup35Q8R4R6 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup35Q8R4R6 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup35Q8R4R6 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.07□□□□□ -0.48
Nup35Q8R4R6 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.07□□□□□ -0.48
Nup35Q8R4R6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nup35Q8R4R6 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup35Q8R4R6 Gm27742-201ENSMUST00000184667 60 ntBASIC12.07□□□□□ -0.48
Nup35Q8R4R6 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Nup35Q8R4R6 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.07□□□□□ -0.48
Nup35Q8R4R6 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup35Q8R4R6 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup35Q8R4R6 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup35Q8R4R6 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup35Q8R4R6 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.07□□□□□ -0.48
Nup35Q8R4R6 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup35Q8R4R6 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup35Q8R4R6 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup35Q8R4R6 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup35Q8R4R6 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup35Q8R4R6 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup35Q8R4R6 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.06□□□□□ -0.48
Nup35Q8R4R6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup35Q8R4R6 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms