Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn1Q8K0T0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn1Q8K0T0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn1Q8K0T0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn1Q8K0T0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn1Q8K0T0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rtn1Q8K0T0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn1Q8K0T0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn1Q8K0T0 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn1Q8K0T0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn1Q8K0T0 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn1Q8K0T0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn1Q8K0T0 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn1Q8K0T0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn1Q8K0T0 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn1Q8K0T0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn1Q8K0T0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn1Q8K0T0 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn1Q8K0T0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.05■□□□□ 0.32
Rtn1Q8K0T0 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn1Q8K0T0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn1Q8K0T0 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn1Q8K0T0 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rtn1Q8K0T0 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn1Q8K0T0 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.04■□□□□ 0.32
Rtn1Q8K0T0 Gm8749-201ENSMUST00000117737 331 ntBASIC17.04■□□□□ 0.32
Rtn1Q8K0T0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.04■□□□□ 0.32
Rtn1Q8K0T0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.04■□□□□ 0.32
Rtn1Q8K0T0 Gm15483-201ENSMUST00000120338 456 ntBASIC17.04■□□□□ 0.32
Rtn1Q8K0T0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn1Q8K0T0 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.04■□□□□ 0.32
Rtn1Q8K0T0 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn1Q8K0T0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn1Q8K0T0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn1Q8K0T0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn1Q8K0T0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.04■□□□□ 0.32
Rtn1Q8K0T0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.04■□□□□ 0.32
Rtn1Q8K0T0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn1Q8K0T0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn1Q8K0T0 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn1Q8K0T0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rtn1Q8K0T0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn1Q8K0T0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Rtn1Q8K0T0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 Gm11025-201ENSMUST00000140773 466 ntBASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn1Q8K0T0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms