Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim52Q8CDV4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC18.16■□□□□ 0.5
Trim52Q8CDV4 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim52Q8CDV4 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim52Q8CDV4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trim52Q8CDV4 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim52Q8CDV4 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim52Q8CDV4 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim52Q8CDV4 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim52Q8CDV4 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Trim52Q8CDV4 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trim52Q8CDV4 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim52Q8CDV4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim52Q8CDV4 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim52Q8CDV4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim52Q8CDV4 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim52Q8CDV4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim52Q8CDV4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim52Q8CDV4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim52Q8CDV4 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trim52Q8CDV4 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trim52Q8CDV4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim52Q8CDV4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim52Q8CDV4 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim52Q8CDV4 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim52Q8CDV4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim52Q8CDV4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim52Q8CDV4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim52Q8CDV4 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim52Q8CDV4 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim52Q8CDV4 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim52Q8CDV4 Gm9252-201ENSMUST00000172364 1602 ntBASIC18.14■□□□□ 0.49
Trim52Q8CDV4 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim52Q8CDV4 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC18.14■□□□□ 0.49
Trim52Q8CDV4 Gm11424-201ENSMUST00000121929 829 ntBASIC18.14■□□□□ 0.49
Trim52Q8CDV4 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim52Q8CDV4 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC18.14■□□□□ 0.49
Trim52Q8CDV4 Gm20445-201ENSMUST00000061905 565 ntBASIC18.14■□□□□ 0.49
Trim52Q8CDV4 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trim52Q8CDV4 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim52Q8CDV4 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim52Q8CDV4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim52Q8CDV4 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim52Q8CDV4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim52Q8CDV4 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim52Q8CDV4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim52Q8CDV4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim52Q8CDV4 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim52Q8CDV4 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim52Q8CDV4 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim52Q8CDV4 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim52Q8CDV4 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim52Q8CDV4 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim52Q8CDV4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim52Q8CDV4 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trim52Q8CDV4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim52Q8CDV4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim52Q8CDV4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trim52Q8CDV4 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim52Q8CDV4 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim52Q8CDV4 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC18.13■□□□□ 0.49
Trim52Q8CDV4 Gm45195-201ENSMUST00000205597 1008 ntBASIC18.13■□□□□ 0.49
Trim52Q8CDV4 Gm7390-201ENSMUST00000212452 1216 ntBASIC18.13■□□□□ 0.49
Trim52Q8CDV4 AC121804.3-201ENSMUST00000223420 295 ntBASIC18.13■□□□□ 0.49
Trim52Q8CDV4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim52Q8CDV4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim52Q8CDV4 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC18.13■□□□□ 0.49
Trim52Q8CDV4 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim52Q8CDV4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim52Q8CDV4 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms