Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cfap54Q8C6S9 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.99□□□□□ -0.17
Cfap54Q8C6S9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cfap54Q8C6S9 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Gm45784-201ENSMUST00000188360 142 ntBASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cfap54Q8C6S9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 BC001981-202ENSMUST00000191393 1545 ntBASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Efs-202ENSMUST00000227037 2540 ntBASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cfap54Q8C6S9 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap54Q8C6S9 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap54Q8C6S9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap54Q8C6S9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap54Q8C6S9 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap54Q8C6S9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap54Q8C6S9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap54Q8C6S9 Gm5187-201ENSMUST00000117317 991 ntBASIC13.96□□□□□ -0.17
Cfap54Q8C6S9 Gm18307-201ENSMUST00000206864 949 ntBASIC13.96□□□□□ -0.17
Cfap54Q8C6S9 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.96□□□□□ -0.17
Cfap54Q8C6S9 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.96□□□□□ -0.17
Cfap54Q8C6S9 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.96□□□□□ -0.17
Cfap54Q8C6S9 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.96□□□□□ -0.17
Cfap54Q8C6S9 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap54Q8C6S9 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap54Q8C6S9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap54Q8C6S9 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.96□□□□□ -0.18
Cfap54Q8C6S9 Gm37230-201ENSMUST00000194491 818 ntBASIC13.96□□□□□ -0.18
Cfap54Q8C6S9 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cfap54Q8C6S9 Mir125a-201ENSMUST00000083545 68 ntBASIC13.96□□□□□ -0.18
Cfap54Q8C6S9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.96□□□□□ -0.18
Cfap54Q8C6S9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cfap54Q8C6S9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cfap54Q8C6S9 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.96□□□□□ -0.18
Cfap54Q8C6S9 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.96□□□□□ -0.18
Cfap54Q8C6S9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms