Protein–RNA interactions for Protein: Q8C3X2

Ccdc90b, Coiled-coil domain-containing protein 90B, mitochondrial, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc90bQ8C3X2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Gm8318-201ENSMUST00000182954 872 ntBASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc90bQ8C3X2 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.33□□□□□ -0.11
Ccdc90bQ8C3X2 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc90bQ8C3X2 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc90bQ8C3X2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc90bQ8C3X2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ccdc90bQ8C3X2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ccdc90bQ8C3X2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc90bQ8C3X2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.33□□□□□ -0.12
Ccdc90bQ8C3X2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.33□□□□□ -0.12
Ccdc90bQ8C3X2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc90bQ8C3X2 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc90bQ8C3X2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc90bQ8C3X2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
Ccdc90bQ8C3X2 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc90bQ8C3X2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc90bQ8C3X2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc90bQ8C3X2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc90bQ8C3X2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc90bQ8C3X2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc90bQ8C3X2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc90bQ8C3X2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc90bQ8C3X2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc90bQ8C3X2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Ccdc90bQ8C3X2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc90bQ8C3X2 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc90bQ8C3X2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc90bQ8C3X2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc90bQ8C3X2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc90bQ8C3X2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Gm25745-201ENSMUST00000174945 133 ntBASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc90bQ8C3X2 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc90bQ8C3X2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc90bQ8C3X2 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc90bQ8C3X2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc90bQ8C3X2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ccdc90bQ8C3X2 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms