Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim47Q8C0E3 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim47Q8C0E3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim47Q8C0E3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Trim47Q8C0E3 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trim47Q8C0E3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim47Q8C0E3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim47Q8C0E3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm22065-201ENSMUST00000103753 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm22066-201ENSMUST00000103761 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm24932-201ENSMUST00000103763 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm24115-201ENSMUST00000103799 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm22190-201ENSMUST00000103827 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm22191-201ENSMUST00000103831 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm24721-201ENSMUST00000103849 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm28018-201ENSMUST00000103869 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm26399-201ENSMUST00000103937 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Mir449b-201ENSMUST00000104833 80 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm8749-201ENSMUST00000117737 331 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm5479-201ENSMUST00000160578 435 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm25349-201ENSMUST00000177728 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm23616-201ENSMUST00000177797 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm25871-201ENSMUST00000177816 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm24752-201ENSMUST00000178240 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm24496-201ENSMUST00000178287 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm25649-201ENSMUST00000178476 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm25548-201ENSMUST00000178681 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm23147-201ENSMUST00000178841 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm26095-201ENSMUST00000179270 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm22171-201ENSMUST00000179283 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm23936-201ENSMUST00000179354 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm22619-201ENSMUST00000179516 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm25255-201ENSMUST00000179579 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm24755-201ENSMUST00000179691 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm26506-201ENSMUST00000179692 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm25086-201ENSMUST00000179931 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm23243-201ENSMUST00000180047 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm24659-201ENSMUST00000180212 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm24169-201ENSMUST00000180244 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm23689-201ENSMUST00000180354 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm27359-201ENSMUST00000184153 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm27785-201ENSMUST00000184268 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm27466-201ENSMUST00000184396 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm27703-201ENSMUST00000184836 110 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.37■□□□□ 0.21
Trim47Q8C0E3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim47Q8C0E3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Gm25287-201ENSMUST00000103846 110 ntBASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Gm22918-201ENSMUST00000103855 110 ntBASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim47Q8C0E3 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms