Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Gm15165-201ENSMUST00000118140 502 ntBASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Prpf18Q8BM39 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Gm15372-201ENSMUST00000120729 834 ntBASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Gm17807-201ENSMUST00000186869 298 ntBASIC14.1□□□□□ -0.15
Prpf18Q8BM39 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf18Q8BM39 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf18Q8BM39 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Prpf18Q8BM39 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Prpf18Q8BM39 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Prpf18Q8BM39 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Prpf18Q8BM39 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Prpf18Q8BM39 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Prpf18Q8BM39 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Prpf18Q8BM39 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
Prpf18Q8BM39 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms