Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh20Q8BIZ0 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdh20Q8BIZ0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh20Q8BIZ0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh20Q8BIZ0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pcdh20Q8BIZ0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh20Q8BIZ0 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh20Q8BIZ0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh20Q8BIZ0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh20Q8BIZ0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh20Q8BIZ0 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh20Q8BIZ0 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh20Q8BIZ0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Gm5364-201ENSMUST00000216789 889 ntBASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Pcdh20Q8BIZ0 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh20Q8BIZ0 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh20Q8BIZ0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh20Q8BIZ0 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh20Q8BIZ0 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.46□□□□□ -0.1
Pcdh20Q8BIZ0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh20Q8BIZ0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 Gm14140-201ENSMUST00000119999 995 ntBASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 Gm5682-201ENSMUST00000173402 505 ntBASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 Gm27628-201ENSMUST00000184911 107 ntBASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdh20Q8BIZ0 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms