Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk3bQ80YF6 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.52□□□□□ -0.4
Upk3bQ80YF6 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Upk3bQ80YF6 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Upk3bQ80YF6 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Upk3bQ80YF6 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Upk3bQ80YF6 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Upk3bQ80YF6 Gm27704-201ENSMUST00000185094 107 ntBASIC12.52□□□□□ -0.41
Upk3bQ80YF6 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3bQ80YF6 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3bQ80YF6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3bQ80YF6 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.52□□□□□ -0.41
Upk3bQ80YF6 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Upk3bQ80YF6 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Upk3bQ80YF6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3bQ80YF6 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Upk3bQ80YF6 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3bQ80YF6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.52□□□□□ -0.41
Upk3bQ80YF6 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3bQ80YF6 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3bQ80YF6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3bQ80YF6 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3bQ80YF6 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3bQ80YF6 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3bQ80YF6 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3bQ80YF6 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3bQ80YF6 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3bQ80YF6 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3bQ80YF6 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3bQ80YF6 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3bQ80YF6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3bQ80YF6 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.52□□□□□ -0.41
Upk3bQ80YF6 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3bQ80YF6 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.52□□□□□ -0.41
Upk3bQ80YF6 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.52□□□□□ -0.41
Upk3bQ80YF6 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Gm6296-201ENSMUST00000222599 943 ntBASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Upk3bQ80YF6 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Gm12644-201ENSMUST00000119935 606 ntBASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Gm27646-201ENSMUST00000183989 110 ntBASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms