Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ush1gQ80T11 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ush1gQ80T11 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ush1gQ80T11 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.18■□□□□ 0.18
Ush1gQ80T11 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ush1gQ80T11 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ush1gQ80T11 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ush1gQ80T11 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ush1gQ80T11 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ush1gQ80T11 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ush1gQ80T11 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ush1gQ80T11 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ush1gQ80T11 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ush1gQ80T11 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Ush1gQ80T11 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ush1gQ80T11 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ush1gQ80T11 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ush1gQ80T11 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ush1gQ80T11 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ush1gQ80T11 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.17■□□□□ 0.18
Ush1gQ80T11 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ush1gQ80T11 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ush1gQ80T11 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ush1gQ80T11 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ush1gQ80T11 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.17■□□□□ 0.18
Ush1gQ80T11 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.17■□□□□ 0.18
Ush1gQ80T11 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.17■□□□□ 0.18
Ush1gQ80T11 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Ush1gQ80T11 Gm25144-201ENSMUST00000179561 110 ntBASIC16.17■□□□□ 0.18
Ush1gQ80T11 Gm25352-201ENSMUST00000179815 110 ntBASIC16.17■□□□□ 0.18
Ush1gQ80T11 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ush1gQ80T11 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.17■□□□□ 0.18
Ush1gQ80T11 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ush1gQ80T11 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.17■□□□□ 0.18
Ush1gQ80T11 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.17■□□□□ 0.18
Ush1gQ80T11 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ush1gQ80T11 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ush1gQ80T11 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ush1gQ80T11 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ush1gQ80T11 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ush1gQ80T11 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.17■□□□□ 0.18
Ush1gQ80T11 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ush1gQ80T11 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ush1gQ80T11 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ush1gQ80T11 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ush1gQ80T11 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1gQ80T11 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1gQ80T11 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1gQ80T11 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1gQ80T11 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1gQ80T11 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1gQ80T11 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1gQ80T11 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1gQ80T11 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1gQ80T11 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1gQ80T11 Gm13823-201ENSMUST00000119930 345 ntBASIC16.16■□□□□ 0.18
Ush1gQ80T11 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.16■□□□□ 0.18
Ush1gQ80T11 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1gQ80T11 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1gQ80T11 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1gQ80T11 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1gQ80T11 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.16■□□□□ 0.18
Ush1gQ80T11 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.16■□□□□ 0.18
Ush1gQ80T11 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1gQ80T11 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ush1gQ80T11 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1gQ80T11 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Ush1gQ80T11 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1gQ80T11 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.16■□□□□ 0.18
Ush1gQ80T11 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1gQ80T11 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1gQ80T11 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1gQ80T11 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1gQ80T11 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1gQ80T11 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1gQ80T11 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ush1gQ80T11 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ush1gQ80T11 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1gQ80T11 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1gQ80T11 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ush1gQ80T11 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1gQ80T11 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1gQ80T11 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1gQ80T11 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1gQ80T11 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1gQ80T11 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1gQ80T11 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.15■□□□□ 0.18
Ush1gQ80T11 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ush1gQ80T11 Gm43767-201ENSMUST00000198933 381 ntBASIC16.15■□□□□ 0.18
Ush1gQ80T11 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1gQ80T11 Gm18049-201ENSMUST00000208909 581 ntBASIC16.15■□□□□ 0.18
Ush1gQ80T11 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.15■□□□□ 0.18
Ush1gQ80T11 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1gQ80T11 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ush1gQ80T11 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1gQ80T11 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1gQ80T11 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1gQ80T11 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1gQ80T11 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1gQ80T11 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms