Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nphp3Q7TNH6 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Nphp3Q7TNH6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nphp3Q7TNH6 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.95■□□□□ 0.46
Nphp3Q7TNH6 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nphp3Q7TNH6 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nphp3Q7TNH6 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nphp3Q7TNH6 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nphp3Q7TNH6 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.95■□□□□ 0.46
Nphp3Q7TNH6 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nphp3Q7TNH6 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Nphp3Q7TNH6 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nphp3Q7TNH6 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.95■□□□□ 0.46
Nphp3Q7TNH6 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Nphp3Q7TNH6 Gm25948-201ENSMUST00000175334 112 ntBASIC17.95■□□□□ 0.46
Nphp3Q7TNH6 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.95■□□□□ 0.46
Nphp3Q7TNH6 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nphp3Q7TNH6 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nphp3Q7TNH6 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nphp3Q7TNH6 Efs-202ENSMUST00000227037 2540 ntBASIC17.94■□□□□ 0.46
Nphp3Q7TNH6 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nphp3Q7TNH6 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.94■□□□□ 0.46
Nphp3Q7TNH6 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
Nphp3Q7TNH6 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nphp3Q7TNH6 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nphp3Q7TNH6 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nphp3Q7TNH6 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.94■□□□□ 0.46
Nphp3Q7TNH6 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nphp3Q7TNH6 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nphp3Q7TNH6 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Nphp3Q7TNH6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nphp3Q7TNH6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nphp3Q7TNH6 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nphp3Q7TNH6 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.94■□□□□ 0.46
Nphp3Q7TNH6 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.94■□□□□ 0.46
Nphp3Q7TNH6 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nphp3Q7TNH6 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.94■□□□□ 0.46
Nphp3Q7TNH6 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.94■□□□□ 0.46
Nphp3Q7TNH6 Gm2451-201ENSMUST00000199447 999 ntBASIC17.94■□□□□ 0.46
Nphp3Q7TNH6 Gm10290-201ENSMUST00000200451 999 ntBASIC17.94■□□□□ 0.46
Nphp3Q7TNH6 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nphp3Q7TNH6 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nphp3Q7TNH6 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.94■□□□□ 0.46
Nphp3Q7TNH6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nphp3Q7TNH6 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Gm8749-201ENSMUST00000117737 331 ntBASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Gm13015-201ENSMUST00000118674 204 ntBASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Gm10253-201ENSMUST00000194270 940 ntBASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nphp3Q7TNH6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nphp3Q7TNH6 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nphp3Q7TNH6 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nphp3Q7TNH6 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
Nphp3Q7TNH6 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nphp3Q7TNH6 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Nphp3Q7TNH6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nphp3Q7TNH6 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nphp3Q7TNH6 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nphp3Q7TNH6 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nphp3Q7TNH6 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nphp3Q7TNH6 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Nphp3Q7TNH6 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Nphp3Q7TNH6 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nphp3Q7TNH6 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nphp3Q7TNH6 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nphp3Q7TNH6 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nphp3Q7TNH6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nphp3Q7TNH6 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nphp3Q7TNH6 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.92■□□□□ 0.46
Nphp3Q7TNH6 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nphp3Q7TNH6 Gm15920-201ENSMUST00000118998 402 ntBASIC17.92■□□□□ 0.46
Nphp3Q7TNH6 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.92■□□□□ 0.46
Nphp3Q7TNH6 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nphp3Q7TNH6 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nphp3Q7TNH6 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nphp3Q7TNH6 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms