Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Chd4Q6PDQ2 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Chd4Q6PDQ2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd4Q6PDQ2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd4Q6PDQ2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd4Q6PDQ2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd4Q6PDQ2 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Chd4Q6PDQ2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd4Q6PDQ2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd4Q6PDQ2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Chd4Q6PDQ2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd4Q6PDQ2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd4Q6PDQ2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Chd4Q6PDQ2 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd4Q6PDQ2 Gm38037-201ENSMUST00000192600 1624 ntBASIC19.03■□□□□ 0.64
Chd4Q6PDQ2 Gm18187-201ENSMUST00000196476 984 ntBASIC19.03■□□□□ 0.64
Chd4Q6PDQ2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Chd4Q6PDQ2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd4Q6PDQ2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd4Q6PDQ2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd4Q6PDQ2 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd4Q6PDQ2 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Chd4Q6PDQ2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Chd4Q6PDQ2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd4Q6PDQ2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Chd4Q6PDQ2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd4Q6PDQ2 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC19.02■□□□□ 0.64
Chd4Q6PDQ2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd4Q6PDQ2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chd4Q6PDQ2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chd4Q6PDQ2 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chd4Q6PDQ2 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chd4Q6PDQ2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Chd4Q6PDQ2 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Chd4Q6PDQ2 Gm27701-201ENSMUST00000184498 110 ntBASIC19.02■□□□□ 0.63
Chd4Q6PDQ2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC19.02■□□□□ 0.63
Chd4Q6PDQ2 Gm7558-201ENSMUST00000193221 1165 ntBASIC19.02■□□□□ 0.63
Chd4Q6PDQ2 AC165157.4-201ENSMUST00000220587 139 ntBASIC19.02■□□□□ 0.63
Chd4Q6PDQ2 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.63
Chd4Q6PDQ2 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chd4Q6PDQ2 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chd4Q6PDQ2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC19.02■□□□□ 0.63
Chd4Q6PDQ2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chd4Q6PDQ2 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chd4Q6PDQ2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chd4Q6PDQ2 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chd4Q6PDQ2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Chd4Q6PDQ2 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chd4Q6PDQ2 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chd4Q6PDQ2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chd4Q6PDQ2 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC19.01■□□□□ 0.63
Chd4Q6PDQ2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Chd4Q6PDQ2 Gm6283-201ENSMUST00000182369 1000 ntBASIC19.01■□□□□ 0.63
Chd4Q6PDQ2 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC19.01■□□□□ 0.63
Chd4Q6PDQ2 Gm37917-201ENSMUST00000194711 392 ntBASIC19.01■□□□□ 0.63
Chd4Q6PDQ2 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC19.01■□□□□ 0.63
Chd4Q6PDQ2 Gm42690-201ENSMUST00000197921 1836 ntBASIC19.01■□□□□ 0.63
Chd4Q6PDQ2 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC19.01■□□□□ 0.63
Chd4Q6PDQ2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC19.01■□□□□ 0.63
Chd4Q6PDQ2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chd4Q6PDQ2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Chd4Q6PDQ2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd4Q6PDQ2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Chd4Q6PDQ2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd4Q6PDQ2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd4Q6PDQ2 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
Chd4Q6PDQ2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC19■□□□□ 0.63
Chd4Q6PDQ2 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Chd4Q6PDQ2 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC19■□□□□ 0.63
Chd4Q6PDQ2 Ighv8-14-201ENSMUST00000196781 358 ntBASIC19■□□□□ 0.63
Chd4Q6PDQ2 Gm7067-201ENSMUST00000207698 1249 ntBASIC19■□□□□ 0.63
Chd4Q6PDQ2 Gm18027-201ENSMUST00000218947 619 ntBASIC19■□□□□ 0.63
Chd4Q6PDQ2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd4Q6PDQ2 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Chd4Q6PDQ2 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Chd4Q6PDQ2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19■□□□□ 0.63
Chd4Q6PDQ2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chd4Q6PDQ2 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chd4Q6PDQ2 Gm11478-201ENSMUST00000117851 599 ntBASIC19■□□□□ 0.63
Chd4Q6PDQ2 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC19■□□□□ 0.63
Chd4Q6PDQ2 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
Chd4Q6PDQ2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC19■□□□□ 0.63
Chd4Q6PDQ2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC19■□□□□ 0.63
Chd4Q6PDQ2 Gm44608-201ENSMUST00000206827 855 ntBASIC19■□□□□ 0.63
Chd4Q6PDQ2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC19■□□□□ 0.63
Chd4Q6PDQ2 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd4Q6PDQ2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd4Q6PDQ2 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd4Q6PDQ2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd4Q6PDQ2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd4Q6PDQ2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chd4Q6PDQ2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd4Q6PDQ2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd4Q6PDQ2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd4Q6PDQ2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd4Q6PDQ2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd4Q6PDQ2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chd4Q6PDQ2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd4Q6PDQ2 Gm12882-201ENSMUST00000121696 517 ntBASIC18.99■□□□□ 0.63
Chd4Q6PDQ2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 147.5 ms