Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Gm5177-201ENSMUST00000183092 997 ntBASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc2Q6PDG5 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Gm6736-201ENSMUST00000166583 948 ntBASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Gm2756-201ENSMUST00000195851 400 ntBASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc2Q6PDG5 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc2Q6PDG5 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc2Q6PDG5 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc2Q6PDG5 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Smarcc2Q6PDG5 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc2Q6PDG5 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc2Q6PDG5 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Smarcc2Q6PDG5 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Smarcc2Q6PDG5 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.23■□□□□ 0.35
Smarcc2Q6PDG5 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.23■□□□□ 0.35
Smarcc2Q6PDG5 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc2Q6PDG5 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc2Q6PDG5 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc2Q6PDG5 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc2Q6PDG5 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc2Q6PDG5 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc2Q6PDG5 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Smarcc2Q6PDG5 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc2Q6PDG5 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc2Q6PDG5 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.23■□□□□ 0.35
Smarcc2Q6PDG5 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Smarcc2Q6PDG5 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc2Q6PDG5 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc2Q6PDG5 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc2Q6PDG5 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc2Q6PDG5 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Smarcc2Q6PDG5 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc2Q6PDG5 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc2Q6PDG5 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc2Q6PDG5 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.22■□□□□ 0.35
Smarcc2Q6PDG5 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Smarcc2Q6PDG5 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc2Q6PDG5 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Smarcc2Q6PDG5 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc2Q6PDG5 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Smarcc2Q6PDG5 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc2Q6PDG5 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Smarcc2Q6PDG5 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc2Q6PDG5 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Smarcc2Q6PDG5 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc2Q6PDG5 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Smarcc2Q6PDG5 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Smarcc2Q6PDG5 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcc2Q6PDG5 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.22■□□□□ 0.35
Smarcc2Q6PDG5 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcc2Q6PDG5 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.21■□□□□ 0.35
Smarcc2Q6PDG5 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcc2Q6PDG5 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcc2Q6PDG5 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Smarcc2Q6PDG5 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms