Protein–RNA interactions for Protein: Q6P9K8

Caskin1, Caskin-1, mousemouse

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Caskin1Q6P9K8 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Caskin1Q6P9K8 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Caskin1Q6P9K8 Gm5356-201ENSMUST00000093326 615 ntBASIC21.33■■□□□ 1.01
Caskin1Q6P9K8 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Caskin1Q6P9K8 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Caskin1Q6P9K8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Caskin1Q6P9K8 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Caskin1Q6P9K8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Caskin1Q6P9K8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC21.33■■□□□ 1
Caskin1Q6P9K8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Caskin1Q6P9K8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC21.32■■□□□ 1
Caskin1Q6P9K8 Gm5303-201ENSMUST00000117943 1252 ntBASIC21.32■■□□□ 1
Caskin1Q6P9K8 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC21.32■■□□□ 1
Caskin1Q6P9K8 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC21.32■■□□□ 1
Caskin1Q6P9K8 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC21.32■■□□□ 1
Caskin1Q6P9K8 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Caskin1Q6P9K8 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Caskin1Q6P9K8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Caskin1Q6P9K8 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Caskin1Q6P9K8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Caskin1Q6P9K8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Caskin1Q6P9K8 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Caskin1Q6P9K8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Caskin1Q6P9K8 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC21.32■■□□□ 1
Caskin1Q6P9K8 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC21.32■■□□□ 1
Caskin1Q6P9K8 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Caskin1Q6P9K8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Caskin1Q6P9K8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Caskin1Q6P9K8 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Caskin1Q6P9K8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Caskin1Q6P9K8 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Caskin1Q6P9K8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC21.31■■□□□ 1
Caskin1Q6P9K8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Caskin1Q6P9K8 Mir1894-201ENSMUST00000122802 81 ntBASIC21.31■■□□□ 1
Caskin1Q6P9K8 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC21.31■■□□□ 1
Caskin1Q6P9K8 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC21.31■■□□□ 1
Caskin1Q6P9K8 AC155258.1-201ENSMUST00000219303 253 ntBASIC21.31■■□□□ 1
Caskin1Q6P9K8 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Caskin1Q6P9K8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Caskin1Q6P9K8 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Caskin1Q6P9K8 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Caskin1Q6P9K8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Caskin1Q6P9K8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Caskin1Q6P9K8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Caskin1Q6P9K8 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Caskin1Q6P9K8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Caskin1Q6P9K8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Caskin1Q6P9K8 AC133083.1-201ENSMUST00000221736 2209 ntBASIC21.31■■□□□ 1
Caskin1Q6P9K8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Caskin1Q6P9K8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Caskin1Q6P9K8 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Caskin1Q6P9K8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Caskin1Q6P9K8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Caskin1Q6P9K8 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC21.3■■□□□ 1
Caskin1Q6P9K8 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC21.3■■□□□ 1
Caskin1Q6P9K8 Gm37714-201ENSMUST00000194742 342 ntBASIC21.3■■□□□ 1
Caskin1Q6P9K8 Gm18307-201ENSMUST00000206864 949 ntBASIC21.3■■□□□ 1
Caskin1Q6P9K8 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Caskin1Q6P9K8 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Caskin1Q6P9K8 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Caskin1Q6P9K8 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC21.3■■□□□ 1
Caskin1Q6P9K8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Caskin1Q6P9K8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Caskin1Q6P9K8 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC21.3■■□□□ 1
Caskin1Q6P9K8 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC21.3■■□□□ 1
Caskin1Q6P9K8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC21.3■■□□□ 1
Caskin1Q6P9K8 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Caskin1Q6P9K8 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Caskin1Q6P9K8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Caskin1Q6P9K8 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Caskin1Q6P9K8 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Caskin1Q6P9K8 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC21.29■■□□□ 1
Caskin1Q6P9K8 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC21.29■■□□□ 1
Caskin1Q6P9K8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Caskin1Q6P9K8 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Caskin1Q6P9K8 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Caskin1Q6P9K8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC21.29■■□□□ 1
Caskin1Q6P9K8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Caskin1Q6P9K8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC21.29■■□□□ 1
Caskin1Q6P9K8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Caskin1Q6P9K8 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Caskin1Q6P9K8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Caskin1Q6P9K8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Caskin1Q6P9K8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC21.29■■□□□ 1
Caskin1Q6P9K8 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC21.29■■□□□ 1
Caskin1Q6P9K8 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Caskin1Q6P9K8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Caskin1Q6P9K8 Gm13034-201ENSMUST00000121342 3177 ntBASIC21.29■■□□□ 1
Caskin1Q6P9K8 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Caskin1Q6P9K8 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Caskin1Q6P9K8 Gm43352-201ENSMUST00000196419 3065 ntBASIC21.29■■□□□ 1
Caskin1Q6P9K8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Caskin1Q6P9K8 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC21.29■■□□□ 1
Caskin1Q6P9K8 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Caskin1Q6P9K8 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
Caskin1Q6P9K8 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC21.29■■□□□ 1
Caskin1Q6P9K8 Ighv8-14-201ENSMUST00000196781 358 ntBASIC21.29■■□□□ 1
Caskin1Q6P9K8 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC21.29■■□□□ 1
Caskin1Q6P9K8 Gm7067-201ENSMUST00000207698 1249 ntBASIC21.29■■□□□ 1
Caskin1Q6P9K8 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms