Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
VcanQ62059 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.66□□□□□ -0.22
VcanQ62059 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.66□□□□□ -0.22
VcanQ62059 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VcanQ62059 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VcanQ62059 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
VcanQ62059 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VcanQ62059 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
VcanQ62059 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VcanQ62059 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VcanQ62059 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
VcanQ62059 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VcanQ62059 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VcanQ62059 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VcanQ62059 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.66□□□□□ -0.22
VcanQ62059 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
VcanQ62059 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.66□□□□□ -0.22
VcanQ62059 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VcanQ62059 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VcanQ62059 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VcanQ62059 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
VcanQ62059 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VcanQ62059 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.66□□□□□ -0.22
VcanQ62059 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.66□□□□□ -0.22
VcanQ62059 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.66□□□□□ -0.22
VcanQ62059 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.66□□□□□ -0.22
VcanQ62059 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VcanQ62059 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VcanQ62059 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
VcanQ62059 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VcanQ62059 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VcanQ62059 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VcanQ62059 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
VcanQ62059 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
VcanQ62059 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VcanQ62059 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VcanQ62059 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.65□□□□□ -0.22
VcanQ62059 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.65□□□□□ -0.22
VcanQ62059 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VcanQ62059 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VcanQ62059 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
VcanQ62059 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.65□□□□□ -0.22
VcanQ62059 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
VcanQ62059 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VcanQ62059 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VcanQ62059 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VcanQ62059 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
VcanQ62059 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VcanQ62059 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VcanQ62059 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.65□□□□□ -0.22
VcanQ62059 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VcanQ62059 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
VcanQ62059 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VcanQ62059 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
VcanQ62059 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
VcanQ62059 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
VcanQ62059 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
VcanQ62059 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.65□□□□□ -0.23
VcanQ62059 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
VcanQ62059 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.65□□□□□ -0.23
VcanQ62059 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.65□□□□□ -0.23
VcanQ62059 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.65□□□□□ -0.23
VcanQ62059 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.65□□□□□ -0.23
VcanQ62059 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
VcanQ62059 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VcanQ62059 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
VcanQ62059 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VcanQ62059 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VcanQ62059 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VcanQ62059 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.64□□□□□ -0.23
VcanQ62059 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.64□□□□□ -0.23
VcanQ62059 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VcanQ62059 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VcanQ62059 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.64□□□□□ -0.23
VcanQ62059 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VcanQ62059 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.64□□□□□ -0.23
VcanQ62059 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
VcanQ62059 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
VcanQ62059 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
VcanQ62059 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VcanQ62059 Gm14722-201ENSMUST00000118943 689 ntBASIC13.64□□□□□ -0.23
VcanQ62059 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.64□□□□□ -0.23
VcanQ62059 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VcanQ62059 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VcanQ62059 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
VcanQ62059 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.64□□□□□ -0.23
VcanQ62059 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VcanQ62059 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
VcanQ62059 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
VcanQ62059 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
VcanQ62059 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
VcanQ62059 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VcanQ62059 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.63□□□□□ -0.23
VcanQ62059 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.63□□□□□ -0.23
VcanQ62059 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcanQ62059 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcanQ62059 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcanQ62059 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.63□□□□□ -0.23
VcanQ62059 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcanQ62059 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms