Protein–RNA interactions for Protein: Q61908

Cmc4, Cx9C motif-containing protein 4, mousemouse

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cmc4Q61908 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cmc4Q61908 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cmc4Q61908 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cmc4Q61908 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cmc4Q61908 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cmc4Q61908 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cmc4Q61908 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cmc4Q61908 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Cmc4Q61908 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC10.75□□□□□ -0.69
Cmc4Q61908 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC10.75□□□□□ -0.69
Cmc4Q61908 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC10.75□□□□□ -0.69
Cmc4Q61908 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC10.75□□□□□ -0.69
Cmc4Q61908 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Cmc4Q61908 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Cmc4Q61908 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC10.75□□□□□ -0.69
Cmc4Q61908 H2af-ps-201ENSMUST00000119066 295 ntBASIC10.75□□□□□ -0.69
Cmc4Q61908 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC10.75□□□□□ -0.69
Cmc4Q61908 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Cmc4Q61908 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Cmc4Q61908 AC164567.1-201ENSMUST00000219185 960 ntBASIC10.75□□□□□ -0.69
Cmc4Q61908 AC131710.1-201ENSMUST00000228336 990 ntBASIC10.75□□□□□ -0.69
Cmc4Q61908 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cmc4Q61908 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Cmc4Q61908 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Cmc4Q61908 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cmc4Q61908 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cmc4Q61908 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Cmc4Q61908 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC10.74□□□□□ -0.69
Cmc4Q61908 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cmc4Q61908 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Cmc4Q61908 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cmc4Q61908 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cmc4Q61908 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Cmc4Q61908 Gm14822-201ENSMUST00000122247 291 ntBASIC10.74□□□□□ -0.69
Cmc4Q61908 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC10.74□□□□□ -0.69
Cmc4Q61908 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cmc4Q61908 Gm27430-201ENSMUST00000184585 107 ntBASIC10.74□□□□□ -0.69
Cmc4Q61908 Gm44333-201ENSMUST00000197168 107 ntBASIC10.74□□□□□ -0.69
Cmc4Q61908 AC124549.3-201ENSMUST00000225541 367 ntBASIC10.74□□□□□ -0.69
Cmc4Q61908 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
Cmc4Q61908 CT030684.1-201ENSMUST00000227292 914 ntBASIC10.74□□□□□ -0.69
Cmc4Q61908 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cmc4Q61908 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC10.74□□□□□ -0.69
Cmc4Q61908 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Cmc4Q61908 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cmc4Q61908 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Cmc4Q61908 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cmc4Q61908 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC10.74□□□□□ -0.69
Cmc4Q61908 Gm42934-201ENSMUST00000196920 1345 ntBASIC10.74□□□□□ -0.69
Cmc4Q61908 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cmc4Q61908 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cmc4Q61908 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cmc4Q61908 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cmc4Q61908 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cmc4Q61908 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cmc4Q61908 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Cmc4Q61908 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cmc4Q61908 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Cmc4Q61908 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cmc4Q61908 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC10.74□□□□□ -0.69
Cmc4Q61908 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cmc4Q61908 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cmc4Q61908 Gm5648-201ENSMUST00000122244 1587 ntBASIC10.73□□□□□ -0.69
Cmc4Q61908 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cmc4Q61908 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Cmc4Q61908 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Cmc4Q61908 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cmc4Q61908 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Cmc4Q61908 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cmc4Q61908 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms