Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col12a1Q60847 Gm43822-201ENSMUST00000200285 476 ntBASIC14.37□□□□□ -0.11
Col12a1Q60847 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.37□□□□□ -0.11
Col12a1Q60847 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col12a1Q60847 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col12a1Q60847 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col12a1Q60847 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col12a1Q60847 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col12a1Q60847 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.37□□□□□ -0.11
Col12a1Q60847 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col12a1Q60847 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col12a1Q60847 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col12a1Q60847 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col12a1Q60847 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col12a1Q60847 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.37□□□□□ -0.11
Col12a1Q60847 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.37□□□□□ -0.11
Col12a1Q60847 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Col12a1Q60847 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Col12a1Q60847 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col12a1Q60847 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col12a1Q60847 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Col12a1Q60847 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
Col12a1Q60847 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col12a1Q60847 Gm26083-201ENSMUST00000157904 193 ntBASIC14.37□□□□□ -0.11
Col12a1Q60847 Gm27486-201ENSMUST00000184923 80 ntBASIC14.37□□□□□ -0.11
Col12a1Q60847 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Col12a1Q60847 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col12a1Q60847 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Col12a1Q60847 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col12a1Q60847 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col12a1Q60847 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Col12a1Q60847 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col12a1Q60847 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Col12a1Q60847 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col12a1Q60847 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.36□□□□□ -0.11
Col12a1Q60847 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.36□□□□□ -0.11
Col12a1Q60847 Gm45880-201ENSMUST00000213041 853 ntBASIC14.36□□□□□ -0.11
Col12a1Q60847 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.36□□□□□ -0.11
Col12a1Q60847 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col12a1Q60847 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col12a1Q60847 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.36□□□□□ -0.11
Col12a1Q60847 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col12a1Q60847 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col12a1Q60847 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col12a1Q60847 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Col12a1Q60847 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Col12a1Q60847 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.36□□□□□ -0.11
Col12a1Q60847 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.36□□□□□ -0.11
Col12a1Q60847 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col12a1Q60847 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col12a1Q60847 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col12a1Q60847 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col12a1Q60847 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col12a1Q60847 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.36□□□□□ -0.11
Col12a1Q60847 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col12a1Q60847 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col12a1Q60847 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Col12a1Q60847 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.35□□□□□ -0.11
Col12a1Q60847 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.35□□□□□ -0.11
Col12a1Q60847 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col12a1Q60847 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col12a1Q60847 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.35□□□□□ -0.11
Col12a1Q60847 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col12a1Q60847 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col12a1Q60847 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col12a1Q60847 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col12a1Q60847 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col12a1Q60847 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col12a1Q60847 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col12a1Q60847 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col12a1Q60847 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col12a1Q60847 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col12a1Q60847 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
Col12a1Q60847 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.35□□□□□ -0.11
Col12a1Q60847 Gm6916-202ENSMUST00000205523 195 ntBASIC14.35□□□□□ -0.11
Col12a1Q60847 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.35□□□□□ -0.11
Col12a1Q60847 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col12a1Q60847 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col12a1Q60847 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col12a1Q60847 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col12a1Q60847 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col12a1Q60847 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col12a1Q60847 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col12a1Q60847 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col12a1Q60847 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col12a1Q60847 Gm15393-201ENSMUST00000120499 219 ntBASIC14.34□□□□□ -0.11
Col12a1Q60847 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col12a1Q60847 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Col12a1Q60847 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.34□□□□□ -0.11
Col12a1Q60847 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col12a1Q60847 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col12a1Q60847 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col12a1Q60847 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.34□□□□□ -0.11
Col12a1Q60847 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col12a1Q60847 Gm27331-201ENSMUST00000183705 60 ntBASIC14.34□□□□□ -0.11
Col12a1Q60847 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Col12a1Q60847 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
Col12a1Q60847 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Col12a1Q60847 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col12a1Q60847 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms