Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ClpbQ60649 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClpbQ60649 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.21□□□□□ -0.13
ClpbQ60649 Gm27702-201ENSMUST00000184512 56 ntBASIC14.21□□□□□ -0.13
ClpbQ60649 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.21□□□□□ -0.13
ClpbQ60649 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ClpbQ60649 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.21□□□□□ -0.13
ClpbQ60649 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClpbQ60649 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClpbQ60649 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClpbQ60649 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ClpbQ60649 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ClpbQ60649 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ClpbQ60649 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ClpbQ60649 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClpbQ60649 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClpbQ60649 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClpbQ60649 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClpbQ60649 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClpbQ60649 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.2□□□□□ -0.14
ClpbQ60649 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClpbQ60649 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClpbQ60649 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ClpbQ60649 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClpbQ60649 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClpbQ60649 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ClpbQ60649 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ClpbQ60649 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ClpbQ60649 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClpbQ60649 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.2□□□□□ -0.14
ClpbQ60649 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.2□□□□□ -0.14
ClpbQ60649 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.2□□□□□ -0.14
ClpbQ60649 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.2□□□□□ -0.14
ClpbQ60649 Gm10175-201ENSMUST00000086013 645 ntBASIC14.2□□□□□ -0.14
ClpbQ60649 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.2□□□□□ -0.14
ClpbQ60649 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ClpbQ60649 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClpbQ60649 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ClpbQ60649 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClpbQ60649 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClpbQ60649 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClpbQ60649 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClpbQ60649 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClpbQ60649 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.2□□□□□ -0.14
ClpbQ60649 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.2□□□□□ -0.14
ClpbQ60649 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClpbQ60649 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClpbQ60649 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClpbQ60649 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.19□□□□□ -0.14
ClpbQ60649 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.19□□□□□ -0.14
ClpbQ60649 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.19□□□□□ -0.14
ClpbQ60649 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.19□□□□□ -0.14
ClpbQ60649 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.19□□□□□ -0.14
ClpbQ60649 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
ClpbQ60649 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ClpbQ60649 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClpbQ60649 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClpbQ60649 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
ClpbQ60649 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClpbQ60649 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClpbQ60649 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClpbQ60649 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClpbQ60649 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClpbQ60649 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClpbQ60649 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClpbQ60649 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClpbQ60649 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClpbQ60649 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.18□□□□□ -0.14
ClpbQ60649 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClpbQ60649 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClpbQ60649 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ClpbQ60649 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClpbQ60649 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClpbQ60649 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms