Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm14371-201ENSMUST00000138925 1518 ntBASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3-1Q5R1I8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3-1Q5R1I8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3-1Q5R1I8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC9.96□□□□□ -0.81
Trav3-1Q5R1I8 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3-1Q5R1I8 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3-1Q5R1I8 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3-1Q5R1I8 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Trav3-1Q5R1I8 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3-1Q5R1I8 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3-1Q5R1I8 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3-1Q5R1I8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-1Q5R1I8 Gm25925-201ENSMUST00000158314 306 ntBASIC9.96□□□□□ -0.82
Trav3-1Q5R1I8 Gm43060-201ENSMUST00000200621 289 ntBASIC9.96□□□□□ -0.82
Trav3-1Q5R1I8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC9.96□□□□□ -0.82
Trav3-1Q5R1I8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-1Q5R1I8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
Trav3-1Q5R1I8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-1Q5R1I8 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-1Q5R1I8 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-1Q5R1I8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-1Q5R1I8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-1Q5R1I8 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-1Q5R1I8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-1Q5R1I8 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-1Q5R1I8 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav3-1Q5R1I8 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Trav3-1Q5R1I8 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-1Q5R1I8 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-1Q5R1I8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav3-1Q5R1I8 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-1Q5R1I8 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-1Q5R1I8 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-1Q5R1I8 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-1Q5R1I8 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-1Q5R1I8 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Map1b-203ENSMUST00000223725 2669 ntBASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Gm38205-201ENSMUST00000192243 258 ntBASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-1Q5R1I8 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms