Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Gm38225-201ENSMUST00000194001 393 ntBASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav6d-4Q5R1I0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Gm24158-201ENSMUST00000175263 71 ntBASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-4Q5R1I0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 Gm25287-201ENSMUST00000103846 110 ntBASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 Gm22918-201ENSMUST00000103855 110 ntBASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms