Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h1Q4VGL6 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h1Q4VGL6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.06■□□□□ 0.32
Rc3h1Q4VGL6 Gm13823-201ENSMUST00000119930 345 ntBASIC17.06■□□□□ 0.32
Rc3h1Q4VGL6 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.06■□□□□ 0.32
Rc3h1Q4VGL6 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.06■□□□□ 0.32
Rc3h1Q4VGL6 Gm45098-201ENSMUST00000207179 657 ntBASIC17.06■□□□□ 0.32
Rc3h1Q4VGL6 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
Rc3h1Q4VGL6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h1Q4VGL6 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h1Q4VGL6 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h1Q4VGL6 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h1Q4VGL6 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h1Q4VGL6 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h1Q4VGL6 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h1Q4VGL6 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h1Q4VGL6 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h1Q4VGL6 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rc3h1Q4VGL6 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rc3h1Q4VGL6 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rc3h1Q4VGL6 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Rc3h1Q4VGL6 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rc3h1Q4VGL6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rc3h1Q4VGL6 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rc3h1Q4VGL6 Gm8410-201ENSMUST00000117225 605 ntBASIC17.05■□□□□ 0.32
Rc3h1Q4VGL6 Gm14057-201ENSMUST00000120631 482 ntBASIC17.05■□□□□ 0.32
Rc3h1Q4VGL6 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.05■□□□□ 0.32
Rc3h1Q4VGL6 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rc3h1Q4VGL6 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rc3h1Q4VGL6 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Rc3h1Q4VGL6 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rc3h1Q4VGL6 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rc3h1Q4VGL6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.05■□□□□ 0.32
Rc3h1Q4VGL6 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rc3h1Q4VGL6 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rc3h1Q4VGL6 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rc3h1Q4VGL6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rc3h1Q4VGL6 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rc3h1Q4VGL6 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 Gm12151-201ENSMUST00000121374 290 ntBASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 Gm17837-201ENSMUST00000186435 985 ntBASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rc3h1Q4VGL6 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.03■□□□□ 0.32
Rc3h1Q4VGL6 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rc3h1Q4VGL6 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
Rc3h1Q4VGL6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rc3h1Q4VGL6 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rc3h1Q4VGL6 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.03■□□□□ 0.32
Rc3h1Q4VGL6 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.03■□□□□ 0.32
Rc3h1Q4VGL6 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.03■□□□□ 0.32
Rc3h1Q4VGL6 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rc3h1Q4VGL6 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rc3h1Q4VGL6 Olfr286-202ENSMUST00000205305 969 ntBASIC17.03■□□□□ 0.32
Rc3h1Q4VGL6 Gm6888-201ENSMUST00000221983 706 ntBASIC17.03■□□□□ 0.32
Rc3h1Q4VGL6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rc3h1Q4VGL6 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rc3h1Q4VGL6 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rc3h1Q4VGL6 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rc3h1Q4VGL6 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rc3h1Q4VGL6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rc3h1Q4VGL6 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.03■□□□□ 0.32
Rc3h1Q4VGL6 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rc3h1Q4VGL6 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rc3h1Q4VGL6 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rc3h1Q4VGL6 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Rc3h1Q4VGL6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rc3h1Q4VGL6 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.02■□□□□ 0.32
Rc3h1Q4VGL6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rc3h1Q4VGL6 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rc3h1Q4VGL6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rc3h1Q4VGL6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rc3h1Q4VGL6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rc3h1Q4VGL6 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rc3h1Q4VGL6 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rc3h1Q4VGL6 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.02■□□□□ 0.32
Rc3h1Q4VGL6 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rc3h1Q4VGL6 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms