Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.31■□□□□ 0.04
Trim80Q3V061 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim80Q3V061 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim80Q3V061 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim80Q3V061 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim80Q3V061 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim80Q3V061 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim80Q3V061 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim80Q3V061 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.31■□□□□ 0.04
Trim80Q3V061 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim80Q3V061 Gm10060-201ENSMUST00000212002 111 ntBASIC15.31■□□□□ 0.04
Trim80Q3V061 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim80Q3V061 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trim80Q3V061 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim80Q3V061 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trim80Q3V061 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim80Q3V061 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim80Q3V061 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim80Q3V061 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim80Q3V061 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.31■□□□□ 0.04
Trim80Q3V061 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim80Q3V061 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim80Q3V061 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim80Q3V061 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim80Q3V061 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trim80Q3V061 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.3■□□□□ 0.04
Trim80Q3V061 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim80Q3V061 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim80Q3V061 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim80Q3V061 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.3■□□□□ 0.04
Trim80Q3V061 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim80Q3V061 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Trim80Q3V061 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim80Q3V061 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim80Q3V061 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim80Q3V061 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.3■□□□□ 0.04
Trim80Q3V061 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.3■□□□□ 0.04
Trim80Q3V061 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Trim80Q3V061 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.3■□□□□ 0.04
Trim80Q3V061 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim80Q3V061 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim80Q3V061 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim80Q3V061 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim80Q3V061 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.3■□□□□ 0.04
Trim80Q3V061 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim80Q3V061 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim80Q3V061 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim80Q3V061 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim80Q3V061 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim80Q3V061 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.3■□□□□ 0.04
Trim80Q3V061 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim80Q3V061 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim80Q3V061 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim80Q3V061 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim80Q3V061 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim80Q3V061 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim80Q3V061 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trim80Q3V061 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.29■□□□□ 0.04
Trim80Q3V061 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim80Q3V061 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim80Q3V061 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Trim80Q3V061 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim80Q3V061 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim80Q3V061 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.29■□□□□ 0.04
Trim80Q3V061 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.29■□□□□ 0.04
Trim80Q3V061 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.29■□□□□ 0.04
Trim80Q3V061 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim80Q3V061 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim80Q3V061 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim80Q3V061 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim80Q3V061 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trim80Q3V061 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim80Q3V061 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim80Q3V061 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Trim80Q3V061 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim80Q3V061 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.29■□□□□ 0.04
Trim80Q3V061 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim80Q3V061 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trim80Q3V061 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim80Q3V061 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim80Q3V061 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim80Q3V061 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim80Q3V061 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.28■□□□□ 0.04
Trim80Q3V061 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim80Q3V061 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim80Q3V061 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim80Q3V061 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim80Q3V061 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim80Q3V061 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim80Q3V061 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trim80Q3V061 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.28■□□□□ 0.04
Trim80Q3V061 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim80Q3V061 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.28■□□□□ 0.04
Trim80Q3V061 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.28■□□□□ 0.04
Trim80Q3V061 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.28■□□□□ 0.04
Trim80Q3V061 Mir5131-201ENSMUST00000175426 93 ntBASIC15.28■□□□□ 0.04
Trim80Q3V061 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.28■□□□□ 0.04
Trim80Q3V061 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.28■□□□□ 0.04
Trim80Q3V061 Gm8000-201ENSMUST00000188378 592 ntBASIC15.28■□□□□ 0.04
Trim80Q3V061 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms