Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28047Q3US59 Gm13464-201ENSMUST00000119418 935 ntBASIC16.83■□□□□ 0.28
Gm28047Q3US59 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28047Q3US59 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28047Q3US59 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28047Q3US59 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28047Q3US59 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.83■□□□□ 0.28
Gm28047Q3US59 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Gm28047Q3US59 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.83■□□□□ 0.28
Gm28047Q3US59 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28047Q3US59 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28047Q3US59 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28047Q3US59 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28047Q3US59 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28047Q3US59 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28047Q3US59 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28047Q3US59 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28047Q3US59 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28047Q3US59 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28047Q3US59 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28047Q3US59 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.83■□□□□ 0.28
Gm28047Q3US59 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28047Q3US59 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28047Q3US59 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28047Q3US59 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28047Q3US59 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28047Q3US59 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.82■□□□□ 0.28
Gm28047Q3US59 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.82■□□□□ 0.28
Gm28047Q3US59 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28047Q3US59 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Gm28047Q3US59 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Gm28047Q3US59 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28047Q3US59 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28047Q3US59 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28047Q3US59 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28047Q3US59 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.82■□□□□ 0.28
Gm28047Q3US59 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28047Q3US59 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28047Q3US59 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28047Q3US59 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.82■□□□□ 0.28
Gm28047Q3US59 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28047Q3US59 Gm9726-201ENSMUST00000180321 678 ntBASIC16.82■□□□□ 0.28
Gm28047Q3US59 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.82■□□□□ 0.28
Gm28047Q3US59 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28047Q3US59 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Gm28047Q3US59 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Gm28047Q3US59 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28047Q3US59 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28047Q3US59 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Gm28047Q3US59 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Gm28047Q3US59 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.81■□□□□ 0.28
Gm28047Q3US59 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Gm28047Q3US59 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.81■□□□□ 0.28
Gm28047Q3US59 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Gm2651-201ENSMUST00000203560 838 ntBASIC16.81■□□□□ 0.28
Gm28047Q3US59 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.81■□□□□ 0.28
Gm28047Q3US59 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.81■□□□□ 0.28
Gm28047Q3US59 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Gm28047Q3US59 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28047Q3US59 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28047Q3US59 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28047Q3US59 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28047Q3US59 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28047Q3US59 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28047Q3US59 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28047Q3US59 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28047Q3US59 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28047Q3US59 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.8■□□□□ 0.28
Gm28047Q3US59 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28047Q3US59 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Gm28047Q3US59 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms