Protein–RNA interactions for Protein: Q3URK1

Ccdc190, Coiled-coil domain-containing protein 190, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc190Q3URK1 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Ccdc190Q3URK1 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc190Q3URK1 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc190Q3URK1 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc190Q3URK1 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc190Q3URK1 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc190Q3URK1 Gm15165-201ENSMUST00000118140 502 ntBASIC13.04□□□□□ -0.32
Ccdc190Q3URK1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Ccdc190Q3URK1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Ccdc190Q3URK1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Ccdc190Q3URK1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Ccdc190Q3URK1 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.04□□□□□ -0.32
Ccdc190Q3URK1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc190Q3URK1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc190Q3URK1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc190Q3URK1 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc190Q3URK1 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc190Q3URK1 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc190Q3URK1 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Ccdc190Q3URK1 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc190Q3URK1 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc190Q3URK1 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc190Q3URK1 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc190Q3URK1 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc190Q3URK1 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.04□□□□□ -0.32
Ccdc190Q3URK1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ccdc190Q3URK1 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc190Q3URK1 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc190Q3URK1 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc190Q3URK1 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc190Q3URK1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc190Q3URK1 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc190Q3URK1 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Ccdc190Q3URK1 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Ccdc190Q3URK1 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc190Q3URK1 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc190Q3URK1 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc190Q3URK1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc190Q3URK1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc190Q3URK1 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Ccdc190Q3URK1 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc190Q3URK1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc190Q3URK1 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Gm15372-201ENSMUST00000120729 834 ntBASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Gm8825-201ENSMUST00000182565 998 ntBASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Gm4518-201ENSMUST00000182638 718 ntBASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.02□□□□□ -0.33
Ccdc190Q3URK1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms