Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.04■□□□□ -0
Naf1Q3UMQ8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.04■□□□□ -0
Naf1Q3UMQ8 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Naf1Q3UMQ8 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.03■□□□□ -0
Naf1Q3UMQ8 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.03■□□□□ -0
Naf1Q3UMQ8 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Naf1Q3UMQ8 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Naf1Q3UMQ8 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Naf1Q3UMQ8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Naf1Q3UMQ8 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.03■□□□□ -0
Naf1Q3UMQ8 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Naf1Q3UMQ8 Gm13015-201ENSMUST00000118674 204 ntBASIC15.03■□□□□ -0
Naf1Q3UMQ8 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.03■□□□□ -0
Naf1Q3UMQ8 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Naf1Q3UMQ8 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.03■□□□□ -0
Naf1Q3UMQ8 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Naf1Q3UMQ8 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.03■□□□□ -0
Naf1Q3UMQ8 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.03■□□□□ -0
Naf1Q3UMQ8 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Naf1Q3UMQ8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Naf1Q3UMQ8 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Naf1Q3UMQ8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Naf1Q3UMQ8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Naf1Q3UMQ8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.03■□□□□ -0
Naf1Q3UMQ8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.03■□□□□ -0
Naf1Q3UMQ8 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Naf1Q3UMQ8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Naf1Q3UMQ8 BC037039-201ENSMUST00000192003 2205 ntBASIC15.02■□□□□ -0
Naf1Q3UMQ8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.02■□□□□ -0
Naf1Q3UMQ8 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Naf1Q3UMQ8 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Naf1Q3UMQ8 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Naf1Q3UMQ8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.02■□□□□ -0
Naf1Q3UMQ8 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Naf1Q3UMQ8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Naf1Q3UMQ8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Naf1Q3UMQ8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Naf1Q3UMQ8 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Naf1Q3UMQ8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Naf1Q3UMQ8 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.02■□□□□ -0
Naf1Q3UMQ8 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Naf1Q3UMQ8 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Naf1Q3UMQ8 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.02■□□□□ -0
Naf1Q3UMQ8 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.02■□□□□ -0
Naf1Q3UMQ8 Gm18737-201ENSMUST00000173594 937 ntBASIC15.02■□□□□ -0
Naf1Q3UMQ8 Gm29541-201ENSMUST00000191351 678 ntBASIC15.02■□□□□ -0
Naf1Q3UMQ8 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.02■□□□□ -0
Naf1Q3UMQ8 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.02■□□□□ -0
Naf1Q3UMQ8 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.02■□□□□ -0
Naf1Q3UMQ8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Naf1Q3UMQ8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
Naf1Q3UMQ8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.02□□□□□ -0.01
Naf1Q3UMQ8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Naf1Q3UMQ8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Naf1Q3UMQ8 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Naf1Q3UMQ8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Naf1Q3UMQ8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Naf1Q3UMQ8 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.02□□□□□ -0.01
Naf1Q3UMQ8 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Naf1Q3UMQ8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Naf1Q3UMQ8 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Naf1Q3UMQ8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Naf1Q3UMQ8 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.02□□□□□ -0.01
Naf1Q3UMQ8 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Naf1Q3UMQ8 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Naf1Q3UMQ8 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Gm15693-201ENSMUST00000120470 637 ntBASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Gm38225-201ENSMUST00000194001 393 ntBASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.01□□□□□ -0.01
Naf1Q3UMQ8 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms