Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Fndc4Q3TR08 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Fndc4Q3TR08 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.64□□□□□ -0.39
Fndc4Q3TR08 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Gm27459-201ENSMUST00000184860 107 ntBASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Gm43347-201ENSMUST00000200226 580 ntBASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Gm19164-201ENSMUST00000210667 640 ntBASIC12.64□□□□□ -0.39
Fndc4Q3TR08 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fndc4Q3TR08 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Gm24589-201ENSMUST00000116692 94 ntBASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Gm7153-201ENSMUST00000117092 455 ntBASIC12.63□□□□□ -0.39
Fndc4Q3TR08 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fndc4Q3TR08 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Gm8097-201ENSMUST00000117903 829 ntBASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fndc4Q3TR08 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.62□□□□□ -0.39
Fndc4Q3TR08 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms