Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Khdc4Q3TCX3 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Khdc4Q3TCX3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Khdc4Q3TCX3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Khdc4Q3TCX3 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc4Q3TCX3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Khdc4Q3TCX3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc4Q3TCX3 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Khdc4Q3TCX3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc4Q3TCX3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc4Q3TCX3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc4Q3TCX3 Rprl2-201ENSMUST00000157150 290 ntBASIC14.08□□□□□ -0.16
Khdc4Q3TCX3 Gm8318-201ENSMUST00000182954 872 ntBASIC14.08□□□□□ -0.16
Khdc4Q3TCX3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.08□□□□□ -0.16
Khdc4Q3TCX3 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.08□□□□□ -0.16
Khdc4Q3TCX3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Khdc4Q3TCX3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.08□□□□□ -0.16
Khdc4Q3TCX3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.08□□□□□ -0.16
Khdc4Q3TCX3 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc4Q3TCX3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc4Q3TCX3 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc4Q3TCX3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc4Q3TCX3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc4Q3TCX3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc4Q3TCX3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc4Q3TCX3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Gm9385-201ENSMUST00000117563 472 ntBASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 AA543401-201ENSMUST00000164248 1269 ntBASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Gm20553-201ENSMUST00000204205 844 ntBASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.07□□□□□ -0.16
Khdc4Q3TCX3 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Mir6990-201ENSMUST00000183724 91 ntBASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Khdc4Q3TCX3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc4Q3TCX3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc4Q3TCX3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Khdc4Q3TCX3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms