Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.76□□□□□ -0.05
Col6a2Q02788 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a2Q02788 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a2Q02788 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a2Q02788 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
Col6a2Q02788 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Col6a2Q02788 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Col6a2Q02788 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Col6a2Q02788 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a2Q02788 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Col6a2Q02788 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a2Q02788 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a2Q02788 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Col6a2Q02788 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a2Q02788 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a2Q02788 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Col6a2Q02788 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Col6a2Q02788 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.75□□□□□ -0.05
Col6a2Q02788 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Col6a2Q02788 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Col6a2Q02788 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Gm2810-201ENSMUST00000118681 990 ntBASIC14.75□□□□□ -0.05
Col6a2Q02788 Gm15920-201ENSMUST00000118998 402 ntBASIC14.75□□□□□ -0.05
Col6a2Q02788 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.75□□□□□ -0.05
Col6a2Q02788 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Col6a2Q02788 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.75□□□□□ -0.05
Col6a2Q02788 Gm38225-201ENSMUST00000194001 393 ntBASIC14.75□□□□□ -0.05
Col6a2Q02788 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.75□□□□□ -0.05
Col6a2Q02788 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a2Q02788 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a2Q02788 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a2Q02788 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Col6a2Q02788 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a2Q02788 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.74□□□□□ -0.05
Col6a2Q02788 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a2Q02788 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Col6a2Q02788 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a2Q02788 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Col6a2Q02788 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a2Q02788 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a2Q02788 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a2Q02788 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm22065-201ENSMUST00000103753 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm22066-201ENSMUST00000103761 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm24932-201ENSMUST00000103763 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm24115-201ENSMUST00000103799 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm22190-201ENSMUST00000103827 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm22191-201ENSMUST00000103831 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm24721-201ENSMUST00000103849 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm28018-201ENSMUST00000103869 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm26399-201ENSMUST00000103937 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm18737-201ENSMUST00000173594 937 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm25349-201ENSMUST00000177728 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm23616-201ENSMUST00000177797 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm25871-201ENSMUST00000177816 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm24752-201ENSMUST00000178240 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm24496-201ENSMUST00000178287 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm25649-201ENSMUST00000178476 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm25548-201ENSMUST00000178681 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm23147-201ENSMUST00000178841 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm26095-201ENSMUST00000179270 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm22171-201ENSMUST00000179283 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm23936-201ENSMUST00000179354 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm22619-201ENSMUST00000179516 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm25255-201ENSMUST00000179579 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm24755-201ENSMUST00000179691 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm26506-201ENSMUST00000179692 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm25086-201ENSMUST00000179931 110 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms