Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Lig3P97386 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lig3P97386 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lig3P97386 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lig3P97386 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.16■□□□□ 0.18
Lig3P97386 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lig3P97386 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lig3P97386 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lig3P97386 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lig3P97386 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.16■□□□□ 0.18
Lig3P97386 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.16■□□□□ 0.18
Lig3P97386 Gm8344-201ENSMUST00000119813 856 ntBASIC16.16■□□□□ 0.18
Lig3P97386 Gm12428-201ENSMUST00000119844 727 ntBASIC16.16■□□□□ 0.18
Lig3P97386 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lig3P97386 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.16■□□□□ 0.18
Lig3P97386 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lig3P97386 Gm22175-201ENSMUST00000175007 78 ntBASIC16.16■□□□□ 0.18
Lig3P97386 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.16■□□□□ 0.18
Lig3P97386 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.16■□□□□ 0.18
Lig3P97386 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lig3P97386 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lig3P97386 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
Lig3P97386 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lig3P97386 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Lig3P97386 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Lig3P97386 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lig3P97386 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lig3P97386 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lig3P97386 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.16■□□□□ 0.18
Lig3P97386 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lig3P97386 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.16■□□□□ 0.18
Lig3P97386 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Lig3P97386 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lig3P97386 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lig3P97386 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lig3P97386 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.15■□□□□ 0.18
Lig3P97386 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lig3P97386 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lig3P97386 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lig3P97386 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lig3P97386 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lig3P97386 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.15■□□□□ 0.18
Lig3P97386 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.15■□□□□ 0.18
Lig3P97386 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lig3P97386 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lig3P97386 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Lig3P97386 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lig3P97386 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Lig3P97386 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.15■□□□□ 0.18
Lig3P97386 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lig3P97386 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lig3P97386 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.15■□□□□ 0.18
Lig3P97386 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.15■□□□□ 0.18
Lig3P97386 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lig3P97386 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lig3P97386 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Lig3P97386 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Lig3P97386 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lig3P97386 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lig3P97386 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Lig3P97386 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lig3P97386 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lig3P97386 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lig3P97386 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lig3P97386 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Lig3P97386 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lig3P97386 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.15■□□□□ 0.18
Lig3P97386 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.15■□□□□ 0.18
Lig3P97386 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Lig3P97386 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Lig3P97386 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lig3P97386 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lig3P97386 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lig3P97386 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lig3P97386 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.14■□□□□ 0.17
Lig3P97386 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Lig3P97386 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lig3P97386 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.14■□□□□ 0.17
Lig3P97386 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lig3P97386 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lig3P97386 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Lig3P97386 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.14■□□□□ 0.17
Lig3P97386 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.14■□□□□ 0.17
Lig3P97386 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lig3P97386 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Lig3P97386 Gm9682-201ENSMUST00000197505 556 ntBASIC16.14■□□□□ 0.17
Lig3P97386 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.14■□□□□ 0.17
Lig3P97386 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lig3P97386 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Lig3P97386 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.14■□□□□ 0.17
Lig3P97386 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lig3P97386 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lig3P97386 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lig3P97386 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lig3P97386 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Lig3P97386 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lig3P97386 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lig3P97386 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Lig3P97386 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lig3P97386 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms