Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43cP86449 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43cP86449 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trim43cP86449 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Trim43cP86449 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim43cP86449 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43cP86449 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43cP86449 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43cP86449 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43cP86449 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43cP86449 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43cP86449 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43cP86449 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43cP86449 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.07■□□□□ 0.16
Trim43cP86449 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.07■□□□□ 0.16
Trim43cP86449 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43cP86449 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43cP86449 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43cP86449 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.07■□□□□ 0.16
Trim43cP86449 Gm43514-201ENSMUST00000198852 424 ntBASIC16.07■□□□□ 0.16
Trim43cP86449 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.07■□□□□ 0.16
Trim43cP86449 Gm45612-201ENSMUST00000211320 160 ntBASIC16.07■□□□□ 0.16
Trim43cP86449 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43cP86449 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43cP86449 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trim43cP86449 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43cP86449 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43cP86449 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trim43cP86449 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43cP86449 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.07■□□□□ 0.16
Trim43cP86449 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.07■□□□□ 0.16
Trim43cP86449 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43cP86449 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.07■□□□□ 0.16
Trim43cP86449 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trim43cP86449 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43cP86449 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43cP86449 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trim43cP86449 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim43cP86449 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43cP86449 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43cP86449 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43cP86449 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43cP86449 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trim43cP86449 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.06■□□□□ 0.16
Trim43cP86449 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43cP86449 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43cP86449 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43cP86449 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43cP86449 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43cP86449 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trim43cP86449 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.06■□□□□ 0.16
Trim43cP86449 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43cP86449 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43cP86449 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43cP86449 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43cP86449 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43cP86449 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43cP86449 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43cP86449 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43cP86449 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43cP86449 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43cP86449 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.06■□□□□ 0.16
Trim43cP86449 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43cP86449 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43cP86449 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43cP86449 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trim43cP86449 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim43cP86449 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43cP86449 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43cP86449 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43cP86449 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.05■□□□□ 0.16
Trim43cP86449 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43cP86449 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43cP86449 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.05■□□□□ 0.16
Trim43cP86449 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43cP86449 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43cP86449 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43cP86449 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43cP86449 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43cP86449 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43cP86449 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43cP86449 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.05■□□□□ 0.16
Trim43cP86449 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43cP86449 Gm9726-201ENSMUST00000180321 678 ntBASIC16.05■□□□□ 0.16
Trim43cP86449 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43cP86449 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.05■□□□□ 0.16
Trim43cP86449 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.05■□□□□ 0.16
Trim43cP86449 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trim43cP86449 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43cP86449 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.05■□□□□ 0.16
Trim43cP86449 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.05■□□□□ 0.16
Trim43cP86449 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43cP86449 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trim43cP86449 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43cP86449 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Trim43cP86449 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43cP86449 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43cP86449 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43cP86449 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43cP86449 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms