Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Stra8P70278 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Stra8P70278 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Stra8P70278 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Stra8P70278 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Stra8P70278 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Stra8P70278 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Stra8P70278 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC20.44■□□□□ 0.86
Stra8P70278 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC20.44■□□□□ 0.86
Stra8P70278 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Stra8P70278 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC20.44■□□□□ 0.86
Stra8P70278 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC20.44■□□□□ 0.86
Stra8P70278 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Stra8P70278 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Stra8P70278 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Stra8P70278 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Stra8P70278 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Stra8P70278 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Stra8P70278 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Stra8P70278 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Stra8P70278 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Stra8P70278 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Stra8P70278 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Stra8P70278 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Stra8P70278 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Stra8P70278 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Stra8P70278 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC20.43■□□□□ 0.86
Stra8P70278 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Stra8P70278 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Stra8P70278 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Stra8P70278 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Stra8P70278 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC20.43■□□□□ 0.86
Stra8P70278 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Stra8P70278 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Stra8P70278 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.43■□□□□ 0.86
Stra8P70278 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Stra8P70278 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.43■□□□□ 0.86
Stra8P70278 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Stra8P70278 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Stra8P70278 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Stra8P70278 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Stra8P70278 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Stra8P70278 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Stra8P70278 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Stra8P70278 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Stra8P70278 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Stra8P70278 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Stra8P70278 Gm43195-201ENSMUST00000200614 2332 ntBASIC20.43■□□□□ 0.86
Stra8P70278 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Stra8P70278 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Stra8P70278 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Stra8P70278 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Stra8P70278 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Stra8P70278 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Stra8P70278 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Stra8P70278 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Stra8P70278 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Stra8P70278 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Stra8P70278 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Stra8P70278 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Stra8P70278 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Stra8P70278 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC20.42■□□□□ 0.86
Stra8P70278 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC20.42■□□□□ 0.86
Stra8P70278 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Stra8P70278 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Stra8P70278 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC20.42■□□□□ 0.86
Stra8P70278 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Stra8P70278 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Stra8P70278 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Stra8P70278 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Stra8P70278 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Stra8P70278 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Stra8P70278 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Stra8P70278 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Stra8P70278 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Stra8P70278 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Stra8P70278 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Stra8P70278 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Stra8P70278 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Stra8P70278 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Stra8P70278 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC20.41■□□□□ 0.86
Stra8P70278 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Stra8P70278 Gm9856-201ENSMUST00000217077 2578 ntBASIC20.41■□□□□ 0.86
Stra8P70278 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Stra8P70278 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.41■□□□□ 0.86
Stra8P70278 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Stra8P70278 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Stra8P70278 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC20.41■□□□□ 0.86
Stra8P70278 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Stra8P70278 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Stra8P70278 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Stra8P70278 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Stra8P70278 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Stra8P70278 Gm43399-201ENSMUST00000202546 2374 ntBASIC20.41■□□□□ 0.86
Stra8P70278 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Stra8P70278 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Stra8P70278 Gm21451-201ENSMUST00000111062 2775 ntBASIC20.4■□□□□ 0.86
Stra8P70278 Gm25990-201ENSMUST00000102440 86 ntBASIC20.4■□□□□ 0.86
Stra8P70278 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Stra8P70278 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms