Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Pdlim4P70271 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pdlim4P70271 Gm27525-201ENSMUST00000184465 107 ntBASIC12.32□□□□□ -0.44
Pdlim4P70271 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.32□□□□□ -0.44
Pdlim4P70271 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pdlim4P70271 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pdlim4P70271 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim4P70271 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.32□□□□□ -0.44
Pdlim4P70271 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.32□□□□□ -0.44
Pdlim4P70271 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.32□□□□□ -0.44
Pdlim4P70271 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim4P70271 BC037039-201ENSMUST00000192003 2205 ntBASIC12.31□□□□□ -0.44
Pdlim4P70271 Celf4-206ENSMUST00000224553 1729 ntBASIC12.31□□□□□ -0.44
Pdlim4P70271 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim4P70271 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim4P70271 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pdlim4P70271 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim4P70271 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim4P70271 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim4P70271 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim4P70271 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.31□□□□□ -0.44
Pdlim4P70271 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim4P70271 Gm12008-201ENSMUST00000117791 755 ntBASIC12.31□□□□□ -0.44
Pdlim4P70271 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim4P70271 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim4P70271 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Pdlim4P70271 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pdlim4P70271 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.31□□□□□ -0.44
Pdlim4P70271 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.31□□□□□ -0.44
Pdlim4P70271 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim4P70271 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim4P70271 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim4P70271 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim4P70271 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.31□□□□□ -0.44
Pdlim4P70271 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim4P70271 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pdlim4P70271 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim4P70271 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim4P70271 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Pdlim4P70271 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim4P70271 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim4P70271 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pdlim4P70271 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.31□□□□□ -0.44
Pdlim4P70271 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim4P70271 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pdlim4P70271 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim4P70271 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.3□□□□□ -0.44
Pdlim4P70271 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.3□□□□□ -0.44
Pdlim4P70271 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim4P70271 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim4P70271 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim4P70271 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim4P70271 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim4P70271 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Pdlim4P70271 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim4P70271 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pdlim4P70271 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim4P70271 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim4P70271 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim4P70271 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pdlim4P70271 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim4P70271 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim4P70271 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim4P70271 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.3□□□□□ -0.44
Pdlim4P70271 Gm11779-201ENSMUST00000118541 368 ntBASIC12.3□□□□□ -0.44
Pdlim4P70271 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim4P70271 Mir8117-201ENSMUST00000184773 107 ntBASIC12.3□□□□□ -0.44
Pdlim4P70271 Gm5264-201ENSMUST00000190584 848 ntBASIC12.3□□□□□ -0.44
Pdlim4P70271 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.3□□□□□ -0.44
Pdlim4P70271 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim4P70271 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim4P70271 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim4P70271 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim4P70271 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim4P70271 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim4P70271 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim4P70271 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms