Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vamp3P63024 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vamp3P63024 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vamp3P63024 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vamp3P63024 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vamp3P63024 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vamp3P63024 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vamp3P63024 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vamp3P63024 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Vamp3P63024 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Vamp3P63024 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Vamp3P63024 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vamp3P63024 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vamp3P63024 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vamp3P63024 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vamp3P63024 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vamp3P63024 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vamp3P63024 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vamp3P63024 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vamp3P63024 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vamp3P63024 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Vamp3P63024 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Vamp3P63024 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vamp3P63024 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vamp3P63024 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vamp3P63024 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vamp3P63024 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.32□□□□□ -0.6
Vamp3P63024 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vamp3P63024 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vamp3P63024 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vamp3P63024 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vamp3P63024 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vamp3P63024 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Vamp3P63024 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vamp3P63024 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vamp3P63024 Gm15375-201ENSMUST00000119510 849 ntBASIC11.32□□□□□ -0.6
Vamp3P63024 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Vamp3P63024 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Vamp3P63024 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vamp3P63024 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vamp3P63024 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Vamp3P63024 Gm9959-201ENSMUST00000068277 390 ntBASIC11.32□□□□□ -0.6
Vamp3P63024 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Vamp3P63024 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vamp3P63024 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.32□□□□□ -0.6
Vamp3P63024 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vamp3P63024 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vamp3P63024 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.32□□□□□ -0.6
Vamp3P63024 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vamp3P63024 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Vamp3P63024 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vamp3P63024 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vamp3P63024 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vamp3P63024 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vamp3P63024 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vamp3P63024 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vamp3P63024 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vamp3P63024 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vamp3P63024 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vamp3P63024 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vamp3P63024 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vamp3P63024 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vamp3P63024 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vamp3P63024 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.31□□□□□ -0.6
Vamp3P63024 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vamp3P63024 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.31□□□□□ -0.6
Vamp3P63024 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vamp3P63024 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vamp3P63024 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vamp3P63024 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.31□□□□□ -0.6
Vamp3P63024 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vamp3P63024 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC11.31□□□□□ -0.6
Vamp3P63024 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
Vamp3P63024 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vamp3P63024 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC11.31□□□□□ -0.6
Vamp3P63024 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC11.31□□□□□ -0.6
Vamp3P63024 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vamp3P63024 Grk6-205ENSMUST00000224653 2976 ntBASIC11.31□□□□□ -0.6
Vamp3P63024 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC11.31□□□□□ -0.6
Vamp3P63024 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.31□□□□□ -0.6
Vamp3P63024 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Vamp3P63024 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vamp3P63024 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vamp3P63024 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.31□□□□□ -0.6
Vamp3P63024 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vamp3P63024 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vamp3P63024 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Vamp3P63024 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Vamp3P63024 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vamp3P63024 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vamp3P63024 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Vamp3P63024 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vamp3P63024 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vamp3P63024 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vamp3P63024 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vamp3P63024 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vamp3P63024 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vamp3P63024 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vamp3P63024 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vamp3P63024 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms