Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Gm17435-202ENSMUST00000212699 1998 ntBASIC8.69□□□□□ -1.02
Rps28P62858 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
Rps28P62858 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rps28P62858 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rps28P62858 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC8.69□□□□□ -1.02
Rps28P62858 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Rps28P62858 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rps28P62858 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rps28P62858 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC8.69□□□□□ -1.02
Rps28P62858 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Rps28P62858 AC153506.1-201ENSMUST00000218768 2915 ntBASIC8.69□□□□□ -1.02
Rps28P62858 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rps28P62858 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Rps28P62858 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rps28P62858 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Rps28P62858 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC8.69□□□□□ -1.02
Rps28P62858 Gm5049-201ENSMUST00000195878 1590 ntBASIC8.69□□□□□ -1.02
Rps28P62858 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC8.69□□□□□ -1.02
Rps28P62858 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rps28P62858 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rps28P62858 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rps28P62858 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC8.69□□□□□ -1.02
Rps28P62858 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rps28P62858 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rps28P62858 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Rps28P62858 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rps28P62858 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC8.68□□□□□ -1.02
Rps28P62858 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Rps28P62858 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC8.68□□□□□ -1.02
Rps28P62858 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Gm5766-201ENSMUST00000160520 1977 ntBASIC8.68□□□□□ -1.02
Rps28P62858 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Rps28P62858 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC8.68□□□□□ -1.02
Rps28P62858 Mir3960-201ENSMUST00000198213 73 ntBASIC8.68□□□□□ -1.02
Rps28P62858 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC8.68□□□□□ -1.02
Rps28P62858 AC151971.4-201ENSMUST00000214717 704 ntBASIC8.68□□□□□ -1.02
Rps28P62858 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC8.68□□□□□ -1.02
Rps28P62858 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC8.68□□□□□ -1.02
Rps28P62858 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC8.68□□□□□ -1.02
Rps28P62858 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Rps28P62858 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Rps28P62858 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC8.68□□□□□ -1.02
Rps28P62858 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Rps28P62858 AC121870.2-201ENSMUST00000214343 1870 ntBASIC8.68□□□□□ -1.02
Rps28P62858 AC166574.4-201ENSMUST00000227165 1937 ntBASIC8.68□□□□□ -1.02
Rps28P62858 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rps28P62858 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC8.67□□□□□ -1.02
Rps28P62858 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Rps28P62858 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC8.67□□□□□ -1.02
Rps28P62858 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Rps28P62858 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC8.67□□□□□ -1.02
Rps28P62858 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Rps28P62858 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC8.67□□□□□ -1.02
Rps28P62858 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rps28P62858 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms