Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a1P61620 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a1P61620 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Sec61a1P61620 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sec61a1P61620 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a1P61620 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a1P61620 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Sec61a1P61620 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a1P61620 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a1P61620 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.05□□□□□ -0.32
Sec61a1P61620 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a1P61620 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a1P61620 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a1P61620 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Sec61a1P61620 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a1P61620 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.05□□□□□ -0.32
Sec61a1P61620 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a1P61620 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Sec61a1P61620 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a1P61620 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Sec61a1P61620 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a1P61620 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.04□□□□□ -0.32
Sec61a1P61620 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a1P61620 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sec61a1P61620 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Sec61a1P61620 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a1P61620 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a1P61620 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.04□□□□□ -0.32
Sec61a1P61620 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Sec61a1P61620 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a1P61620 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
Sec61a1P61620 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a1P61620 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.04□□□□□ -0.32
Sec61a1P61620 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.04□□□□□ -0.32
Sec61a1P61620 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Sec61a1P61620 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a1P61620 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a1P61620 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a1P61620 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Sec61a1P61620 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.04□□□□□ -0.32
Sec61a1P61620 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a1P61620 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a1P61620 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a1P61620 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a1P61620 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a1P61620 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a1P61620 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a1P61620 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a1P61620 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.03□□□□□ -0.32
Sec61a1P61620 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a1P61620 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.03□□□□□ -0.32
Sec61a1P61620 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a1P61620 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a1P61620 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a1P61620 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a1P61620 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a1P61620 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a1P61620 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.03□□□□□ -0.32
Sec61a1P61620 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.03□□□□□ -0.32
Sec61a1P61620 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.03□□□□□ -0.32
Sec61a1P61620 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.03□□□□□ -0.32
Sec61a1P61620 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.03□□□□□ -0.32
Sec61a1P61620 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.03□□□□□ -0.32
Sec61a1P61620 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a1P61620 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Sec61a1P61620 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.03□□□□□ -0.32
Sec61a1P61620 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.03□□□□□ -0.32
Sec61a1P61620 Gm7230-201ENSMUST00000173026 815 ntBASIC13.03□□□□□ -0.32
Sec61a1P61620 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.03□□□□□ -0.32
Sec61a1P61620 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.03□□□□□ -0.32
Sec61a1P61620 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.03□□□□□ -0.32
Sec61a1P61620 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a1P61620 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.03□□□□□ -0.32
Sec61a1P61620 Gm8825-201ENSMUST00000182565 998 ntBASIC13.03□□□□□ -0.32
Sec61a1P61620 Gm4518-201ENSMUST00000182638 718 ntBASIC13.03□□□□□ -0.32
Sec61a1P61620 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.03□□□□□ -0.32
Sec61a1P61620 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.03□□□□□ -0.32
Sec61a1P61620 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.03□□□□□ -0.32
Sec61a1P61620 Gm6443-201ENSMUST00000203599 874 ntBASIC13.03□□□□□ -0.32
Sec61a1P61620 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.03□□□□□ -0.32
Sec61a1P61620 Gm18622-201ENSMUST00000219361 595 ntBASIC13.03□□□□□ -0.32
Sec61a1P61620 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.03□□□□□ -0.32
Sec61a1P61620 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a1P61620 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.03□□□□□ -0.32
Sec61a1P61620 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.03□□□□□ -0.32
Sec61a1P61620 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.03□□□□□ -0.32
Sec61a1P61620 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a1P61620 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a1P61620 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a1P61620 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a1P61620 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a1P61620 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sec61a1P61620 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a1P61620 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61a1P61620 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Sec61a1P61620 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sec61a1P61620 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sec61a1P61620 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Sec61a1P61620 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sec61a1P61620 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms