Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Sox1P53783 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.04■□□□□ -0
Sox1P53783 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Sox1P53783 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Sox1P53783 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.03■□□□□ -0
Sox1P53783 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sox1P53783 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox1P53783 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sox1P53783 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sox1P53783 Gm29127-201ENSMUST00000188304 517 ntBASIC15.03■□□□□ -0
Sox1P53783 Gm43068-201ENSMUST00000201095 1273 ntBASIC15.03■□□□□ -0
Sox1P53783 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox1P53783 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.03■□□□□ -0
Sox1P53783 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Sox1P53783 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Sox1P53783 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.03■□□□□ -0
Sox1P53783 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox1P53783 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Sox1P53783 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Sox1P53783 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.03■□□□□ -0
Sox1P53783 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox1P53783 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sox1P53783 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Sox1P53783 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox1P53783 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox1P53783 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox1P53783 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Sox1P53783 Dctn4-202ENSMUST00000223590 1530 ntBASIC15.02■□□□□ -0
Sox1P53783 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox1P53783 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Sox1P53783 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Sox1P53783 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox1P53783 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox1P53783 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.02■□□□□ -0
Sox1P53783 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.02■□□□□ -0
Sox1P53783 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Sox1P53783 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Sox1P53783 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sox1P53783 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Sox1P53783 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.02■□□□□ -0
Sox1P53783 Gm18307-201ENSMUST00000206864 949 ntBASIC15.02■□□□□ -0
Sox1P53783 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.02■□□□□ -0
Sox1P53783 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox1P53783 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox1P53783 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox1P53783 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox1P53783 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox1P53783 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox1P53783 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Sox1P53783 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.02□□□□□ -0.01
Sox1P53783 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox1P53783 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox1P53783 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox1P53783 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Sox1P53783 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox1P53783 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.02□□□□□ -0.01
Sox1P53783 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox1P53783 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Sox1P53783 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
Sox1P53783 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox1P53783 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox1P53783 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Sox1P53783 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sox1P53783 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC15.01□□□□□ -0.01
Sox1P53783 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.01□□□□□ -0.01
Sox1P53783 Gm5370-201ENSMUST00000187187 574 ntBASIC15.01□□□□□ -0.01
Sox1P53783 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sox1P53783 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC15.01□□□□□ -0.01
Sox1P53783 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox1P53783 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.01□□□□□ -0.01
Sox1P53783 Gm9823-201ENSMUST00000051212 327 ntBASIC15.01□□□□□ -0.01
Sox1P53783 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Sox1P53783 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox1P53783 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox1P53783 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox1P53783 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sox1P53783 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox1P53783 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox1P53783 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox1P53783 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Sox1P53783 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox1P53783 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.01□□□□□ -0.01
Sox1P53783 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox1P53783 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15□□□□□ -0.01
Sox1P53783 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox1P53783 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox1P53783 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox1P53783 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Sox1P53783 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox1P53783 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15□□□□□ -0.01
Sox1P53783 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Sox1P53783 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Sox1P53783 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox1P53783 Gm15782-201ENSMUST00000121073 445 ntBASIC15□□□□□ -0.01
Sox1P53783 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox1P53783 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Sox1P53783 Gm27847-201ENSMUST00000183711 107 ntBASIC15□□□□□ -0.01
Sox1P53783 Gm27375-201ENSMUST00000183799 107 ntBASIC15□□□□□ -0.01
Sox1P53783 AC156560.2-201ENSMUST00000221232 264 ntBASIC15□□□□□ -0.01
Sox1P53783 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms