Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lbx1P52955 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lbx1P52955 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lbx1P52955 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lbx1P52955 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lbx1P52955 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lbx1P52955 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lbx1P52955 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.25□□□□□ -0.13
Lbx1P52955 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lbx1P52955 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lbx1P52955 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lbx1P52955 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Lbx1P52955 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lbx1P52955 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lbx1P52955 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lbx1P52955 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lbx1P52955 Gm11814-201ENSMUST00000119515 929 ntBASIC14.25□□□□□ -0.13
Lbx1P52955 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.25□□□□□ -0.13
Lbx1P52955 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lbx1P52955 Gm8652-201ENSMUST00000181363 964 ntBASIC14.25□□□□□ -0.13
Lbx1P52955 Gm29649-201ENSMUST00000185649 419 ntBASIC14.25□□□□□ -0.13
Lbx1P52955 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.25□□□□□ -0.13
Lbx1P52955 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lbx1P52955 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lbx1P52955 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lbx1P52955 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lbx1P52955 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lbx1P52955 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.25□□□□□ -0.13
Lbx1P52955 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lbx1P52955 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lbx1P52955 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lbx1P52955 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lbx1P52955 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Lbx1P52955 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Lbx1P52955 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lbx1P52955 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lbx1P52955 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lbx1P52955 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lbx1P52955 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Lbx1P52955 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Lbx1P52955 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lbx1P52955 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lbx1P52955 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lbx1P52955 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lbx1P52955 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lbx1P52955 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lbx1P52955 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lbx1P52955 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lbx1P52955 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lbx1P52955 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lbx1P52955 Gm13342-201ENSMUST00000121055 207 ntBASIC14.24□□□□□ -0.13
Lbx1P52955 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lbx1P52955 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.24□□□□□ -0.13
Lbx1P52955 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Lbx1P52955 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Lbx1P52955 Gm27631-201ENSMUST00000184163 466 ntBASIC14.24□□□□□ -0.13
Lbx1P52955 Gm29127-201ENSMUST00000188304 517 ntBASIC14.24□□□□□ -0.13
Lbx1P52955 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lbx1P52955 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.24□□□□□ -0.13
Lbx1P52955 Gm45930-201ENSMUST00000221330 292 ntBASIC14.24□□□□□ -0.13
Lbx1P52955 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.24□□□□□ -0.13
Lbx1P52955 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lbx1P52955 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lbx1P52955 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lbx1P52955 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.24□□□□□ -0.13
Lbx1P52955 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.24□□□□□ -0.13
Lbx1P52955 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Lbx1P52955 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Lbx1P52955 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lbx1P52955 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lbx1P52955 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.23□□□□□ -0.13
Lbx1P52955 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lbx1P52955 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lbx1P52955 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lbx1P52955 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lbx1P52955 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lbx1P52955 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lbx1P52955 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.23□□□□□ -0.13
Lbx1P52955 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lbx1P52955 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.23□□□□□ -0.13
Lbx1P52955 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.23□□□□□ -0.13
Lbx1P52955 Gm5363-201ENSMUST00000211927 938 ntBASIC14.23□□□□□ -0.13
Lbx1P52955 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.23□□□□□ -0.13
Lbx1P52955 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lbx1P52955 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lbx1P52955 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lbx1P52955 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lbx1P52955 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.23□□□□□ -0.13
Lbx1P52955 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lbx1P52955 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lbx1P52955 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lbx1P52955 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lbx1P52955 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lbx1P52955 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lbx1P52955 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lbx1P52955 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lbx1P52955 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.23□□□□□ -0.13
Lbx1P52955 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lbx1P52955 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Lbx1P52955 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms