Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.98□□□□□ -0.01
Lhx3P50481 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.98□□□□□ -0.01
Lhx3P50481 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Lhx3P50481 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx3P50481 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Lhx3P50481 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx3P50481 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Lhx3P50481 Carlr-201ENSMUST00000181515 2574 ntBASIC14.98□□□□□ -0.01
Lhx3P50481 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx3P50481 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx3P50481 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx3P50481 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.98□□□□□ -0.01
Lhx3P50481 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx3P50481 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx3P50481 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx3P50481 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx3P50481 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx3P50481 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx3P50481 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx3P50481 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Lhx3P50481 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx3P50481 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx3P50481 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx3P50481 Gm13015-201ENSMUST00000118674 204 ntBASIC14.97□□□□□ -0.01
Lhx3P50481 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Lhx3P50481 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.97□□□□□ -0.01
Lhx3P50481 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.97□□□□□ -0.01
Lhx3P50481 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.97□□□□□ -0.01
Lhx3P50481 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx3P50481 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.97□□□□□ -0.01
Lhx3P50481 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.97□□□□□ -0.01
Lhx3P50481 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx3P50481 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx3P50481 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx3P50481 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx3P50481 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx3P50481 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx3P50481 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx3P50481 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx3P50481 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx3P50481 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx3P50481 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx3P50481 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx3P50481 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx3P50481 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx3P50481 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx3P50481 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx3P50481 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx3P50481 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Lhx3P50481 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx3P50481 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx3P50481 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx3P50481 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx3P50481 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx3P50481 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Lhx3P50481 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Lhx3P50481 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx3P50481 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Lhx3P50481 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.96□□□□□ -0.01
Lhx3P50481 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Lhx3P50481 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.96□□□□□ -0.01
Lhx3P50481 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Lhx3P50481 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx3P50481 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.96□□□□□ -0.01
Lhx3P50481 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.96□□□□□ -0.01
Lhx3P50481 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx3P50481 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx3P50481 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Lhx3P50481 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx3P50481 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx3P50481 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lhx3P50481 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lhx3P50481 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.95□□□□□ -0.02
Lhx3P50481 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.95□□□□□ -0.02
Lhx3P50481 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx3P50481 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.95□□□□□ -0.02
Lhx3P50481 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx3P50481 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx3P50481 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Lhx3P50481 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx3P50481 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx3P50481 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Lhx3P50481 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx3P50481 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.95□□□□□ -0.02
Lhx3P50481 Mir449b-201ENSMUST00000104833 80 ntBASIC14.95□□□□□ -0.02
Lhx3P50481 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.95□□□□□ -0.02
Lhx3P50481 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.95□□□□□ -0.02
Lhx3P50481 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx3P50481 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.95□□□□□ -0.02
Lhx3P50481 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx3P50481 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx3P50481 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx3P50481 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Lhx3P50481 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx3P50481 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx3P50481 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Lhx3P50481 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx3P50481 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Lhx3P50481 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Lhx3P50481 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms