Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Brca1P48754 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Brca1P48754 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Brca1P48754 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Brca1P48754 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.35■□□□□ 0.21
Brca1P48754 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Brca1P48754 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.34■□□□□ 0.21
Brca1P48754 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Brca1P48754 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Brca1P48754 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Brca1P48754 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Brca1P48754 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Brca1P48754 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Brca1P48754 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.34■□□□□ 0.21
Brca1P48754 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Brca1P48754 Gm18307-201ENSMUST00000206864 949 ntBASIC16.34■□□□□ 0.21
Brca1P48754 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.34■□□□□ 0.21
Brca1P48754 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Brca1P48754 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.34■□□□□ 0.21
Brca1P48754 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Brca1P48754 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Brca1P48754 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Brca1P48754 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Brca1P48754 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Brca1P48754 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Brca1P48754 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.33■□□□□ 0.21
Brca1P48754 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.33■□□□□ 0.21
Brca1P48754 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.33■□□□□ 0.21
Brca1P48754 Gm17794-201ENSMUST00000220252 955 ntBASIC16.33■□□□□ 0.21
Brca1P48754 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.33■□□□□ 0.21
Brca1P48754 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Brca1P48754 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Brca1P48754 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Brca1P48754 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Brca1P48754 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Brca1P48754 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Brca1P48754 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.33■□□□□ 0.2
Brca1P48754 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Brca1P48754 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.33■□□□□ 0.2
Brca1P48754 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.33■□□□□ 0.2
Brca1P48754 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Brca1P48754 CT009713.10-202ENSMUST00000225734 696 ntBASIC16.33■□□□□ 0.2
Brca1P48754 AC125117.1-201ENSMUST00000228121 468 ntBASIC16.33■□□□□ 0.2
Brca1P48754 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Brca1P48754 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Brca1P48754 Olfr582-201ENSMUST00000098212 960 ntBASIC16.33■□□□□ 0.2
Brca1P48754 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Brca1P48754 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Brca1P48754 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.33■□□□□ 0.2
Brca1P48754 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.33■□□□□ 0.2
Brca1P48754 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Brca1P48754 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Brca1P48754 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.33■□□□□ 0.2
Brca1P48754 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Brca1P48754 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Brca1P48754 Prob1-201ENSMUST00000097619 3021 ntBASIC16.33■□□□□ 0.2
Brca1P48754 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Brca1P48754 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.32■□□□□ 0.2
Brca1P48754 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Brca1P48754 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Brca1P48754 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Brca1P48754 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Brca1P48754 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Brca1P48754 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Brca1P48754 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC16.32■□□□□ 0.2
Brca1P48754 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Brca1P48754 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.32■□□□□ 0.2
Brca1P48754 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Brca1P48754 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Brca1P48754 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Brca1P48754 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Brca1P48754 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Brca1P48754 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Brca1P48754 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.32■□□□□ 0.2
Brca1P48754 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Brca1P48754 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC16.31■□□□□ 0.2
Brca1P48754 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Brca1P48754 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Brca1P48754 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Brca1P48754 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Brca1P48754 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Brca1P48754 Gm27731-201ENSMUST00000185192 107 ntBASIC16.31■□□□□ 0.2
Brca1P48754 Gm44608-201ENSMUST00000206827 855 ntBASIC16.31■□□□□ 0.2
Brca1P48754 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC16.31■□□□□ 0.2
Brca1P48754 Gm7172-201ENSMUST00000218047 1152 ntBASIC16.31■□□□□ 0.2
Brca1P48754 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.31■□□□□ 0.2
Brca1P48754 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Brca1P48754 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Brca1P48754 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Brca1P48754 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Brca1P48754 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Brca1P48754 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Brca1P48754 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Brca1P48754 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Brca1P48754 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC16.31■□□□□ 0.2
Brca1P48754 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Brca1P48754 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Brca1P48754 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Brca1P48754 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Brca1P48754 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms