Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox2P48432 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox2P48432 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox2P48432 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox2P48432 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.89□□□□□ -0.19
Sox2P48432 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox2P48432 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sox2P48432 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox2P48432 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Sox2P48432 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Sox2P48432 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox2P48432 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.89□□□□□ -0.19
Sox2P48432 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox2P48432 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.89□□□□□ -0.19
Sox2P48432 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox2P48432 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox2P48432 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox2P48432 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox2P48432 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox2P48432 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox2P48432 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sox2P48432 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox2P48432 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox2P48432 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox2P48432 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox2P48432 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.88□□□□□ -0.19
Sox2P48432 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox2P48432 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox2P48432 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.88□□□□□ -0.19
Sox2P48432 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Sox2P48432 Gm8097-201ENSMUST00000117903 829 ntBASIC13.88□□□□□ -0.19
Sox2P48432 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.88□□□□□ -0.19
Sox2P48432 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.88□□□□□ -0.19
Sox2P48432 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.88□□□□□ -0.19
Sox2P48432 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.88□□□□□ -0.19
Sox2P48432 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Sox2P48432 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox2P48432 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox2P48432 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox2P48432 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox2P48432 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox2P48432 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox2P48432 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox2P48432 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Sox2P48432 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sox2P48432 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox2P48432 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox2P48432 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox2P48432 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox2P48432 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.88□□□□□ -0.19
Sox2P48432 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox2P48432 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox2P48432 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox2P48432 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox2P48432 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox2P48432 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox2P48432 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Sox2P48432 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox2P48432 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox2P48432 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox2P48432 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Sox2P48432 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox2P48432 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox2P48432 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.87□□□□□ -0.19
Sox2P48432 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Sox2P48432 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.87□□□□□ -0.19
Sox2P48432 Gm43767-201ENSMUST00000198933 381 ntBASIC13.87□□□□□ -0.19
Sox2P48432 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.87□□□□□ -0.19
Sox2P48432 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox2P48432 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox2P48432 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox2P48432 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox2P48432 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox2P48432 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox2P48432 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Sox2P48432 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Sox2P48432 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox2P48432 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.86□□□□□ -0.19
Sox2P48432 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox2P48432 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox2P48432 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox2P48432 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox2P48432 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sox2P48432 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sox2P48432 Gm6659-201ENSMUST00000174752 547 ntBASIC13.86□□□□□ -0.19
Sox2P48432 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sox2P48432 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox2P48432 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.86□□□□□ -0.19
Sox2P48432 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.86□□□□□ -0.19
Sox2P48432 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.86□□□□□ -0.19
Sox2P48432 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox2P48432 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Sox2P48432 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox2P48432 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.86□□□□□ -0.19
Sox2P48432 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox2P48432 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox2P48432 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox2P48432 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox2P48432 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Sox2P48432 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms