Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Sdc2P43407 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdc2P43407 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdc2P43407 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Sdc2P43407 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdc2P43407 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdc2P43407 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
Sdc2P43407 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdc2P43407 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdc2P43407 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.6■□□□□ 0.25
Sdc2P43407 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Sdc2P43407 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc2P43407 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc2P43407 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc2P43407 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc2P43407 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc2P43407 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc2P43407 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc2P43407 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc2P43407 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc2P43407 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc2P43407 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.59■□□□□ 0.25
Sdc2P43407 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc2P43407 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Sdc2P43407 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.59■□□□□ 0.25
Sdc2P43407 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc2P43407 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc2P43407 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc2P43407 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc2P43407 Gm17971-201ENSMUST00000190239 806 ntBASIC16.59■□□□□ 0.25
Sdc2P43407 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.59■□□□□ 0.25
Sdc2P43407 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
Sdc2P43407 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.59■□□□□ 0.25
Sdc2P43407 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Sdc2P43407 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc2P43407 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc2P43407 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Sdc2P43407 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Sdc2P43407 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Sdc2P43407 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc2P43407 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Sdc2P43407 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc2P43407 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Sdc2P43407 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc2P43407 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdc2P43407 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Sdc2P43407 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sdc2P43407 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sdc2P43407 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sdc2P43407 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sdc2P43407 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Sdc2P43407 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Sdc2P43407 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdc2P43407 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.58■□□□□ 0.24
Sdc2P43407 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Sdc2P43407 Gm4899-201ENSMUST00000178708 719 ntBASIC16.58■□□□□ 0.24
Sdc2P43407 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Sdc2P43407 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.58■□□□□ 0.24
Sdc2P43407 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdc2P43407 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Sdc2P43407 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdc2P43407 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdc2P43407 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdc2P43407 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdc2P43407 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdc2P43407 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Sdc2P43407 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sdc2P43407 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdc2P43407 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdc2P43407 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.58■□□□□ 0.24
Sdc2P43407 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdc2P43407 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdc2P43407 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdc2P43407 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdc2P43407 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Sdc2P43407 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdc2P43407 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdc2P43407 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdc2P43407 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdc2P43407 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
Sdc2P43407 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sdc2P43407 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sdc2P43407 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Sdc2P43407 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdc2P43407 Gm7153-201ENSMUST00000117092 455 ntBASIC16.57■□□□□ 0.24
Sdc2P43407 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sdc2P43407 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.57■□□□□ 0.24
Sdc2P43407 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Sdc2P43407 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.57■□□□□ 0.24
Sdc2P43407 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdc2P43407 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdc2P43407 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdc2P43407 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdc2P43407 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Sdc2P43407 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdc2P43407 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdc2P43407 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.57■□□□□ 0.24
Sdc2P43407 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdc2P43407 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.57■□□□□ 0.24
Sdc2P43407 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms