Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Tnfsf9P41274 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.15□□□□□ -0.14
Tnfsf9P41274 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.15□□□□□ -0.14
Tnfsf9P41274 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf9P41274 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.15□□□□□ -0.14
Tnfsf9P41274 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.15□□□□□ -0.14
Tnfsf9P41274 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfsf9P41274 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Tnfsf9P41274 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf9P41274 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf9P41274 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf9P41274 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Tnfsf9P41274 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf9P41274 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf9P41274 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf9P41274 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf9P41274 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf9P41274 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf9P41274 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.14□□□□□ -0.15
Tnfsf9P41274 AA543401-201ENSMUST00000164248 1269 ntBASIC14.14□□□□□ -0.15
Tnfsf9P41274 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.14□□□□□ -0.15
Tnfsf9P41274 Gm22175-201ENSMUST00000175007 78 ntBASIC14.14□□□□□ -0.15
Tnfsf9P41274 Gm9824-201ENSMUST00000178707 561 ntBASIC14.14□□□□□ -0.15
Tnfsf9P41274 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.14□□□□□ -0.15
Tnfsf9P41274 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Tnfsf9P41274 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf9P41274 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf9P41274 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf9P41274 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf9P41274 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf9P41274 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf9P41274 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Tnfsf9P41274 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf9P41274 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf9P41274 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Tnfsf9P41274 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf9P41274 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf9P41274 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.13□□□□□ -0.15
Tnfsf9P41274 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.13□□□□□ -0.15
Tnfsf9P41274 Auts2-212ENSMUST00000178555 309 ntBASIC14.13□□□□□ -0.15
Tnfsf9P41274 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf9P41274 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms