Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Abca1P41233 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Abca1P41233 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Abca1P41233 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Abca1P41233 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.33□□□□□ -0.44
Abca1P41233 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Abca1P41233 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Abca1P41233 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Abca1P41233 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Abca1P41233 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Abca1P41233 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.33□□□□□ -0.44
Abca1P41233 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Abca1P41233 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Abca1P41233 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Abca1P41233 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Abca1P41233 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Abca1P41233 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Abca1P41233 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Abca1P41233 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Abca1P41233 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Abca1P41233 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Abca1P41233 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Abca1P41233 Gm16198-201ENSMUST00000118766 670 ntBASIC12.32□□□□□ -0.44
Abca1P41233 Gm11543-201ENSMUST00000120758 370 ntBASIC12.32□□□□□ -0.44
Abca1P41233 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.32□□□□□ -0.44
Abca1P41233 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.32□□□□□ -0.44
Abca1P41233 Gm8318-201ENSMUST00000182954 872 ntBASIC12.32□□□□□ -0.44
Abca1P41233 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.32□□□□□ -0.44
Abca1P41233 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Abca1P41233 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Abca1P41233 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.32□□□□□ -0.44
Abca1P41233 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Abca1P41233 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Abca1P41233 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Abca1P41233 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Abca1P41233 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.32□□□□□ -0.44
Abca1P41233 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.32□□□□□ -0.44
Abca1P41233 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Abca1P41233 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Abca1P41233 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Abca1P41233 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Abca1P41233 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Abca1P41233 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Abca1P41233 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.32□□□□□ -0.44
Abca1P41233 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Abca1P41233 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.32□□□□□ -0.44
Abca1P41233 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.32□□□□□ -0.44
Abca1P41233 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Abca1P41233 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.32□□□□□ -0.44
Abca1P41233 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Abca1P41233 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Abca1P41233 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Abca1P41233 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Abca1P41233 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Abca1P41233 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Abca1P41233 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.32□□□□□ -0.44
Abca1P41233 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Abca1P41233 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.32□□□□□ -0.44
Abca1P41233 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Abca1P41233 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Abca1P41233 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Abca1P41233 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Abca1P41233 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abca1P41233 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abca1P41233 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Abca1P41233 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abca1P41233 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abca1P41233 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.31□□□□□ -0.44
Abca1P41233 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Abca1P41233 Gm10253-201ENSMUST00000194270 940 ntBASIC12.31□□□□□ -0.44
Abca1P41233 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Abca1P41233 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abca1P41233 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abca1P41233 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.31□□□□□ -0.44
Abca1P41233 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abca1P41233 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abca1P41233 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abca1P41233 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abca1P41233 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Abca1P41233 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Abca1P41233 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Abca1P41233 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Abca1P41233 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Abca1P41233 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Abca1P41233 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.31□□□□□ -0.44
Abca1P41233 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Abca1P41233 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.31□□□□□ -0.44
Abca1P41233 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Abca1P41233 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Abca1P41233 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abca1P41233 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abca1P41233 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abca1P41233 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abca1P41233 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Abca1P41233 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Abca1P41233 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abca1P41233 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abca1P41233 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abca1P41233 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abca1P41233 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms