Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdkn1aP39689 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdkn1aP39689 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdkn1aP39689 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.21□□□□□ -0.46
Cdkn1aP39689 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdkn1aP39689 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Cdkn1aP39689 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdkn1aP39689 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdkn1aP39689 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdkn1aP39689 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdkn1aP39689 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdkn1aP39689 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdkn1aP39689 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdkn1aP39689 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.2□□□□□ -0.46
Cdkn1aP39689 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn1aP39689 AA543401-201ENSMUST00000164248 1269 ntBASIC12.2□□□□□ -0.46
Cdkn1aP39689 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.2□□□□□ -0.46
Cdkn1aP39689 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.2□□□□□ -0.46
Cdkn1aP39689 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.2□□□□□ -0.46
Cdkn1aP39689 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cdkn1aP39689 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdkn1aP39689 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdkn1aP39689 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
Cdkn1aP39689 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cdkn1aP39689 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdkn1aP39689 BC037039-201ENSMUST00000192003 2205 ntBASIC12.19□□□□□ -0.46
Cdkn1aP39689 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdkn1aP39689 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdkn1aP39689 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdkn1aP39689 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdkn1aP39689 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cdkn1aP39689 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdkn1aP39689 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdkn1aP39689 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdkn1aP39689 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cdkn1aP39689 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.19□□□□□ -0.46
Cdkn1aP39689 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdkn1aP39689 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.19□□□□□ -0.46
Cdkn1aP39689 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdkn1aP39689 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.19□□□□□ -0.46
Cdkn1aP39689 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdkn1aP39689 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.19□□□□□ -0.46
Cdkn1aP39689 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdkn1aP39689 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdkn1aP39689 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdkn1aP39689 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdkn1aP39689 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.19□□□□□ -0.46
Cdkn1aP39689 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdkn1aP39689 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdkn1aP39689 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdkn1aP39689 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdkn1aP39689 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cdkn1aP39689 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Cdkn1aP39689 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdkn1aP39689 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cdkn1aP39689 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdkn1aP39689 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdkn1aP39689 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdkn1aP39689 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdkn1aP39689 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdkn1aP39689 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdkn1aP39689 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdkn1aP39689 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdkn1aP39689 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdkn1aP39689 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdkn1aP39689 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdkn1aP39689 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdkn1aP39689 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdkn1aP39689 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdkn1aP39689 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdkn1aP39689 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms