Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm15653-201ENSMUST00000119247 907 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.61□□□□□ -0.23
Sftpa1P35242 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.61□□□□□ -0.23
Sftpa1P35242 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm29310-201ENSMUST00000185468 696 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm21825-201ENSMUST00000185728 696 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm29109-201ENSMUST00000185895 696 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm21896-201ENSMUST00000186520 696 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm21873-201ENSMUST00000186728 696 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm21794-201ENSMUST00000187056 696 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm21880-201ENSMUST00000187275 696 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm21826-201ENSMUST00000187451 696 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm21198-201ENSMUST00000188393 696 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm21749-201ENSMUST00000189343 696 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm21901-201ENSMUST00000189568 696 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm29424-201ENSMUST00000189716 696 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm28599-201ENSMUST00000189838 694 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm21867-201ENSMUST00000189917 696 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm29269-201ENSMUST00000190087 696 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm21722-201ENSMUST00000190153 696 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm28423-201ENSMUST00000190701 696 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm21899-201ENSMUST00000190745 696 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm21910-201ENSMUST00000191163 696 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm21849-201ENSMUST00000191571 696 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm28678-201ENSMUST00000191593 696 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm20910-201ENSMUST00000193268 696 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm21871-201ENSMUST00000194621 696 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm18062-201ENSMUST00000208020 547 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Gm18055-201ENSMUST00000208254 547 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.61□□□□□ -0.23
Sftpa1P35242 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sftpa1P35242 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sftpa1P35242 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sftpa1P35242 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sftpa1P35242 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sftpa1P35242 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sftpa1P35242 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sftpa1P35242 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sftpa1P35242 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.6□□□□□ -0.23
Sftpa1P35242 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sftpa1P35242 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sftpa1P35242 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sftpa1P35242 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sftpa1P35242 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.6□□□□□ -0.23
Sftpa1P35242 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sftpa1P35242 Gm6222-201ENSMUST00000120787 396 ntBASIC13.6□□□□□ -0.23
Sftpa1P35242 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.6□□□□□ -0.23
Sftpa1P35242 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sftpa1P35242 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.6□□□□□ -0.23
Sftpa1P35242 Gm3436-201ENSMUST00000179930 840 ntBASIC13.6□□□□□ -0.23
Sftpa1P35242 Gm27631-201ENSMUST00000184163 466 ntBASIC13.6□□□□□ -0.23
Sftpa1P35242 Gm10766-202ENSMUST00000194123 606 ntBASIC13.6□□□□□ -0.23
Sftpa1P35242 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sftpa1P35242 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sftpa1P35242 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.6□□□□□ -0.23
Sftpa1P35242 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.6□□□□□ -0.23
Sftpa1P35242 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sftpa1P35242 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sftpa1P35242 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sftpa1P35242 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sftpa1P35242 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sftpa1P35242 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sftpa1P35242 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sftpa1P35242 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Sftpa1P35242 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.6□□□□□ -0.23
Sftpa1P35242 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sftpa1P35242 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sftpa1P35242 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.6□□□□□ -0.23
Sftpa1P35242 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sftpa1P35242 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sftpa1P35242 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sftpa1P35242 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sftpa1P35242 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sftpa1P35242 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sftpa1P35242 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sftpa1P35242 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sftpa1P35242 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sftpa1P35242 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Sftpa1P35242 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.59□□□□□ -0.23
Sftpa1P35242 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sftpa1P35242 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sftpa1P35242 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms